CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.669e-17
Identity = 57/201 (28.36%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   14 VEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR----KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGT----SLDHGVTAVGYGTE-----------------NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            ++ + +I     + +S QEL+DC+   N GCNGG +  A+  +++N G+ +E+DYP++   G    +R    K  KV  I D+  +  N++        + P++V I       Q Y+ G+      +     +DH V  VG+G +                 + + YWI+KNSWG+ WGE GY R+ R         CG+
Sbjct:  160 IQALWRIKHQQFVDVSVQELLDCERCGN-GCNGGFVWDAYLTVLNNSGLASEKDYPFQ---GDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINM--KLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRG-----NNTCGV 349          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.317e-16
Identity = 52/177 (29.38%), Postives = 91/177 (51.41%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNG-GIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLN--DEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGY--IRMERNVAG 517
            ++A+E    I   SL  LS Q+++DC  + N GC GG    A  ++ +    +  +  YP+KA++G C  + ++   V++ D+        +++  +  ++  P+ V ++   M++Q Y  GI    C +   +H V   G+       YW+V+NSWGSSWG  GY  ++M  NV G
Sbjct:  129 VSAIESARAIQGKSLDYLSVQQVIDCSFN-NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDA--MSWQDYLGGIIQHHCSSGEANHAVLITGFDRTGNTPYWMVRNSWGSSWGVEGYAHVKMGGNVCG 302          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDV--PLNDEKALQKAVANQPVSVAIEGGGM-AFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGY 490
            +A VE          + LSEQELVDC + +  GC G  +     +I  NG ++ E+ YPYKA +G C   R NAK   I D   +  P  D+     A     +SV I    + +F+ Y+      +   G    H +  VGYG++ G  YWI++NSW ++WG+ GY
Sbjct:  140 VATVESNYLSYDNVSLDLSEQELVDCASQH--GCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREGRCQ--RPNAKRYGIKDLCQIYPPNGDKIRTYLATKQAALSVIIGIRDLDSFRHYDGRTILQSDNGGKRNFHAINIVGYGSKQGVRYWIIRNSWDTTWGDKGY 301          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.502e-15
Identity = 59/178 (33.15%), Postives = 88/178 (49.44%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIID-NGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLND-EKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGY--IRMERNVAG 517
            + AVE    I    L  LS Q+++DC  SYN  GCNGG    A  ++      +  + +YP+KA +G C  +  +    +I  Y     +D E  + KA+    P+ V ++   +++Q Y  GI    C +   +H V   G+       YWIV+NSWGSSWG  GY  ++M  NV G
Sbjct:  138 VGAVESAYAIKGKPLEDLSVQQVIDC--SYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDA--VSWQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCG 311          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.707e-15
Identity = 55/176 (31.25%), Postives = 83/176 (47.16%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD-------HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 511
            +AA E          + L+EQELVDC + +  GC+G  +    E+I  NG +  E  Y Y A + SC   R NA+   I +Y  +   +   +++A+A    ++A+  G      +    + GR     D       H V  VGY    G DYWIV+NSW ++WG+ GY     N+
Sbjct:  138 VAATESAYLAYRNQSLDLAEQELVDCASQH--GCHGDTIPRGIEYIQHNGVVQ-ESYYRYVAREQSCR--RPNAQRFGISNYCQIYPPNVNKIREALAQTHSAIAVIIGIKDLDAFRH--YDGRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI 306          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.707e-15
Identity = 62/177 (35.03%), Postives = 84/177 (47.46%), Query Frame = 2
Query:   56 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP-----LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--------LDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            LS QE+V C + Y +GC+GG           + G+  E  +PY A D  C   R+N       DY  V       N+     + V + P++VA E     F  Y SGI+    G S         +H V  VGYG +   G +YWI+KNSWGS+WGE+GY R+ R      T +C I
Sbjct:  282 LSPQEVVSC-SPYAQGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKDSPCKP-RENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHD-DFLHYHSGIYH-HTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRG-----TDECAI 449          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 62/177 (35.03%), Postives = 83/177 (46.89%), Query Frame = 2
Query:   56 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP-----LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--------LDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            LS QE+V C + Y +GC+GG           + G+  E  +PY A D  C   ++N       +Y  V       N+     + V + P++VA E     F  Y SGI+    G S         +H V  VGYG +   G DYWIVKNSWGS WGE+GY R+ R      T +C I
Sbjct:  282 LSPQEVVSC-SPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKP-KENCLRYYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHD-DFLHYHSGIYH-HTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRG-----TDECAI 449          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.271e-14
Identity = 60/155 (38.71%), Postives = 81/155 (52.26%), Query Frame = 2
Query:   44 SLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDG-SCDTYRKNAKV-VTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM 499
            S + LS Q  V+C  S   GCNGG     F F     GI  E+D PYKA+ G SC T    A+   T   Y +     + AL   +   PV++A+     AFQ Y+SGI+      T ++H V  VGY  +   D + +KNSWGS WGE+GY+R+
Sbjct:  285 STLQLSNQNAVNCIAS---GCNGGWSGNYFNFF-KTPGIAYEKDDPYKAVTGTSCITTSSVARFKYTNYGYTE---KTKAALLAELKKGPVTIAVYVDS-AFQNYKSGIYNSATKYTGINHLVLLVGY--DQATDAYKIKNSWGSWWGESGYMRI 429          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.271e-14
Identity = 59/181 (32.60%), Postives = 83/181 (45.86%), Query Frame = 2
Query:   50 ISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA----IDGSCDTYRKNAKVVTIDDYEDVP--LNDEKALQKAVANQPVSVAIEGGGMA---------FQLYESGIFTGRCG-TSLDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            +  S Q +V CD   +  C+GG +   + F+   G   T+E  PY++      G+C T           D  D+P      KA+   +    +  A+  GG           F  YESG++    G     H V  VGYGT++ G DYWI+KNSWG  WGE GY R+ R     +T +CGI
Sbjct:  123 VKYSPQYVVSCDRG-DMACDGGWLPSVWRFLTKTG-TTTDECVPYQSGSTGARGTCPT--------KCADGSDLPHLYKATKAVDYGLDAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIR-----MTNECGI 288          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.831e-14
Identity = 62/184 (33.70%), Postives = 85/184 (46.20%), Query Frame = 2
Query:   56 LSEQELVDCDTSYNEGCNGGLMDYAFEFII-----DNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVP----LNDEKALQ-KAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS----------LDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            LS Q +VDC + Y+EGCNGG     F F+I     ++ G+  +   PY   D    T  KN       DY  +       +EK +Q + ++N P  V  E     FQ Y+ GI+      +           +H V  VGYG +  +G  YW VKNSWG  WGE GY R+ R      T +CG+
Sbjct:  272 LSPQTVVDC-SPYSEGCNGG-----FPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYE-DFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRG-----TDECGV 443          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATW_MOUSE4.669e-1728.36Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATO_MOUSE2.317e-1629.38Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
PEPT1_PSOOV3.026e-1634.13Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATO_HUMAN1.502e-1533.15Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
PEPT1_DERPT5.707e-1531.25Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATC_MOUSE5.707e-1535.03Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATC_RAT7.454e-1535.03Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
GMSA_DICDI1.271e-1438.71Gamete and mating-type specific protein A OS=Dicty... [more]
CATB3_GIALA1.271e-1432.60Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATC_SCHMA4.831e-1433.70Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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