CX294794

Overview
NameCX294794
Unique NameCX294794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig577 contig Ccv1_Contig577:1..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1DA_DANRE (Casein kinase I isoform delta-A OS=Danio rerio GN=csnk1da PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1E_MOUSE (Casein kinase I isoform epsilon OS=Mus musculus GN=Csnk1e PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.060e-29
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1E_HUMAN (Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.060e-29
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1E_CHICK (Casein kinase I isoform epsilon OS=Gallus gallus GN=CSNK1E PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.060e-29
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY++ISEKK+STPIEVLCK YPSEF +Y ++CRSLRF+DKPDYSYL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  220 TKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1_TOXGO (Casein kinase I OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.083e-29
Identity = 52/74 (70.27%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVL 225
            TKK KYDKI EKK+STPIE+LCK +P EF++Y +YCRSLRFED+PDY+YL+RLF+DLF REG+Q+D++FDWT +
Sbjct:  220 TKKDKYDKIMEKKMSTPIEILCKHFPFEFITYLNYCRSLRFEDRPDYAYLRRLFKDLFFREGYQYDFIFDWTFI 293          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: HHP1_SCHPO (Casein kinase I homolog hhp1 OS=Schizosaccharomyces pombe GN=hhp1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.443e-26
Identity = 50/78 (64.10%), Postives = 65/78 (83.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKYPQ 237
            TKKQKY+KI EKK+STP EVLC+ +P EF  Y +Y RSLRF+DKPDY+YL++LFRDLF R+ ++FDY+FDWT+ +  Q
Sbjct:  222 TKKQKYEKIMEKKISTPTEVLCRGFPQEFSIYLNYTRSLRFDDKPDYAYLRKLFRDLFCRQSYEFDYMFDWTLKRKTQ 299          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1_PLAYO (Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWT 219
            +KK KYDKI EKK+ST +EVLC++   EFV+Y +YCRSLRFED+PDY+YL+RL +DLFIREGF +D++FDWT
Sbjct:  220 SKKDKYDKIMEKKISTSVEVLCRNTSFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1_PLAF7 (Casein kinase I OS=Plasmodium falciparum (isolate 3D7) GN=CK1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWT 219
            +KK KYDKI EKK+ST +EVLC++   EFV+Y +YCRSLRFED+PDY+YL+RL +DLFIREGF +D++FDWT
Sbjct:  220 SKKDKYDKIMEKKISTSVEVLCRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1_PLAF4 (Casein kinase I OS=Plasmodium falciparum (isolate Dd2) GN=CK1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWT 219
            +KK KYDKI EKK+ST +EVLC++   EFV+Y +YCRSLRFED+PDY+YL+RL +DLFIREGF +D++FDWT
Sbjct:  220 SKKDKYDKIMEKKISTSVEVLCRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_XENLA (Casein kinase I isoform alpha OS=Xenopus laevis GN=csnk1a1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
The following BLAST results are available for this feature:
BLAST of CX294794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KC1DA_DANRE6.212e-3072.37Casein kinase I isoform delta-A OS=Danio rerio GN=... [more]
KC1E_MOUSE1.060e-2972.37Casein kinase I isoform epsilon OS=Mus musculus GN... [more]
KC1E_HUMAN1.060e-2972.37Casein kinase I isoform epsilon OS=Homo sapiens GN... [more]
KC1E_CHICK1.060e-2972.37Casein kinase I isoform epsilon OS=Gallus gallus G... [more]
KC1_TOXGO3.083e-2970.27Casein kinase I OS=Toxoplasma gondii PE=2 SV=1[more]
HHP1_SCHPO2.443e-2664.10Casein kinase I homolog hhp1 OS=Schizosaccharomyce... [more]
KC1_PLAYO1.212e-2568.06Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1... [more]
KC1_PLAF71.212e-2568.06Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1_PLAF41.212e-2568.06Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1A_XENLA3.528e-2566.67Casein kinase I isoform alpha OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionC05056A06SK PhIFruit1 Citrus clementina cDNA clone C05056A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294794 ID=CX294794; Name=CX294794; organism=Citrus clementina; type=EST; length=606bp
GGCACAAAAAAGCAAAAATATGATAAGATCAGCGAAAAGAAGGTGTCAAC
TCCGATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCATACT
TTCATTACTGTCGATCGTTGCGGTTTGAGGACAAACCAGATTATTCATAT
TTAAAGAGGCTTTTCCGCGACTTATTTATTCGAGAAGGTTTTCAGTTTGA
CTATGTATTTGATTGGACTGTATTAAAGTACCCTCAGATTGGTTCCAGCT
CTAAAGGAAGGCATTCCAGTGGGAAGGTAGGCTTAACCCCAGGACCATCT
GCTGAAAGACCAGAAAGGGGTTCAGTTGGGAAGGAGATTAGGGACAAATT
GTCTGGTGCAGTTGAAGCATTTTCAAGAAAAAATGCTGCTGGTACTCCTC
ATCGTGATCATCCCAGACACAAGAGTTCAGATGATGGTCCTTCATCTAAG
CATGTGAACCCTGATTCTGAAAAAGGACGAAGCTTTTCCCGGTATGGAAG
CACTTCAAGAAAAGCTGTAATCGCAAGCACTAAACCTGGTTCATCTGGTG
AATTCAGTGAGTGTCGCTCTAGCCGACTAGTCTCAAGCAGTGGCCGCTTG
TCTACC
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