CX294794

Overview
NameCX294794
Unique NameCX294794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_SHEEP (Casein kinase I isoform alpha OS=Ovis aries GN=CSNK1A1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_RAT (Casein kinase I isoform alpha OS=Rattus norvegicus GN=Csnk1a1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_RABIT (Casein kinase I isoform alpha OS=Oryctolagus cuniculus GN=CSNK1A1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_MOUSE (Casein kinase I isoform alpha OS=Mus musculus GN=Csnk1a1 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_HUMAN (Casein kinase I isoform alpha OS=Homo sapiens GN=CSNK1A1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_CHICK (Casein kinase I isoform alpha OS=Gallus gallus GN=CSNK1A1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_BOVIN (Casein kinase I isoform alpha OS=Bos taurus GN=CSNK1A1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1AL_HUMAN (Casein kinase I isoform alpha-like OS=Homo sapiens GN=CSNK1A1L PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK+STP+EVLCK +P+EF  Y +YCR LRFE+ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  228 TKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_DROME (Casein kinase I isoform alpha OS=Drosophila melanogaster GN=CkIalpha PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TK+QKY+KISEKK+STPIEVLCK  P+EF  Y +YCRSLRFE++PDY YL++LFR LF     Q+DY++DWT+LK
Sbjct:  231 TKQQKYEKISEKKMSTPIEVLCKGSPAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILFRTLNHQYDYIYDWTMLK 305          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: HHP2_SCHPO (Casein kinase I homolog hhp2 OS=Schizosaccharomyces pombe GN=hhp2 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24
Identity = 45/76 (59.21%), Postives = 61/76 (80.26%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY +I + K+ TP+EVLCK  P EF++Y  Y R L F +KP+Y+YL++LFRDL IR+G+Q+DYVFDW +LKY
Sbjct:  221 TKEQKYQRIRDTKIGTPLEVLCKGLPEEFITYMCYTRQLSFTEKPNYAYLRKLFRDLLIRKGYQYDYVFDWMILKY 296          
The following BLAST results are available for this feature:
BLAST of CX294794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KC1A_SHEEP3.528e-2566.67Casein kinase I isoform alpha OS=Ovis aries GN=CSN... [more]
KC1A_RAT3.528e-2566.67Casein kinase I isoform alpha OS=Rattus norvegicus... [more]
KC1A_RABIT3.528e-2566.67Casein kinase I isoform alpha OS=Oryctolagus cunic... [more]
KC1A_MOUSE3.528e-2566.67Casein kinase I isoform alpha OS=Mus musculus GN=C... [more]
KC1A_HUMAN3.528e-2566.67Casein kinase I isoform alpha OS=Homo sapiens GN=C... [more]
KC1A_CHICK3.528e-2566.67Casein kinase I isoform alpha OS=Gallus gallus GN=... [more]
KC1A_BOVIN3.528e-2566.67Casein kinase I isoform alpha OS=Bos taurus GN=CSN... [more]
KC1AL_HUMAN4.607e-2566.67Casein kinase I isoform alpha-like OS=Homo sapiens... [more]
KC1A_DROME1.026e-2466.67Casein kinase I isoform alpha OS=Drosophila melano... [more]
HHP2_SCHPO6.653e-2459.21Casein kinase I homolog hhp2 OS=Schizosaccharomyce... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05056A06SK PhIFruit1 Citrus clementina cDNA clone C05056A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294794 ID=CX294794; Name=CX294794; organism=Citrus clementina; type=EST; length=606bp
GGCACAAAAAAGCAAAAATATGATAAGATCAGCGAAAAGAAGGTGTCAAC
TCCGATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCATACT
TTCATTACTGTCGATCGTTGCGGTTTGAGGACAAACCAGATTATTCATAT
TTAAAGAGGCTTTTCCGCGACTTATTTATTCGAGAAGGTTTTCAGTTTGA
CTATGTATTTGATTGGACTGTATTAAAGTACCCTCAGATTGGTTCCAGCT
CTAAAGGAAGGCATTCCAGTGGGAAGGTAGGCTTAACCCCAGGACCATCT
GCTGAAAGACCAGAAAGGGGTTCAGTTGGGAAGGAGATTAGGGACAAATT
GTCTGGTGCAGTTGAAGCATTTTCAAGAAAAAATGCTGCTGGTACTCCTC
ATCGTGATCATCCCAGACACAAGAGTTCAGATGATGGTCCTTCATCTAAG
CATGTGAACCCTGATTCTGAAAAAGGACGAAGCTTTTCCCGGTATGGAAG
CACTTCAAGAAAAGCTGTAATCGCAAGCACTAAACCTGGTTCATCTGGTG
AATTCAGTGAGTGTCGCTCTAGCCGACTAGTCTCAAGCAGTGGCCGCTTG
TCTACC
back to top