CX294794

Overview
NameCX294794
Unique NameCX294794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: DCO_DROME (Discs overgrown protein kinase OS=Drosophila melanogaster GN=dco PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 45/75 (60.00%), Postives = 63/75 (84.00%), Query Frame = 1
Query:    7 KKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            K+QKY++ISEKK+ST I VLCK +PSEFV+Y ++CR + F+ +PDY +L++LFR+LF R GF +DYVFDW +LK+
Sbjct:  221 KRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKF 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KIN20_CAEEL (Casein kinase I isoform delta OS=Caenorhabditis elegans GN=kin-20 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.062e-21
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TK+QKY+ ISEKK+ST ++ LC  YP  F  Y +YCRSL FE++PDY YL+ LFR LF R+ F +DYVFDW   K+
Sbjct:  401 TKRQKYELISEKKISTRVDDLCAGYPEAFAQYLNYCRSLGFEEQPDYGYLRNLFRTLFHRQQFCYDYVFDWNTYKF 476          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1_DICDI (Casein kinase I OS=Dictyostelium discoideum GN=cak1-1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.812e-21
Identity = 38/75 (50.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TK+ KY+KI +KK  T I+ LC+ +PSEF ++ +Y R L+FEDKPD+ YL++L R++F+REG+++DY+FDW +++
Sbjct:  220 TKRDKYEKICDKKAQTKIDTLCQGFPSEFATFLNYTRFLKFEDKPDFLYLRKLLREMFVREGYRYDYMFDWVIVR 294          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1A_CAEEL (Casein kinase I isoform alpha OS=Caenorhabditis elegans GN=kin-19 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.090e-21
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            TKKQKY+KISEKK++T +E LCK +P+EF  Y  Y R LRF++ PDY YL++LFR LF     Q+DY FDWT+LK
Sbjct:  227 TKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 301          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: HRR25_YEAST (Casein kinase I homolog HRR25 OS=Saccharomyces cerevisiae GN=HRR25 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.941e-20
Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKY 231
            TKKQKYD+I EKK++  +E LC   P EF  Y  YC++L+F++KPDY +L RLF+DL I+  +  D++FDWT+L+Y
Sbjct:  220 TKKQKYDRIMEKKLNVSVETLCSGLPLEFQEYMAYCKNLKFDEKPDYLFLARLFKDLSIKLEYHNDHLFDWTMLRY 295          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1B_BOVIN (Casein kinase I isoform beta OS=Bos taurus GN=CSNK1B PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.298e-19
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLK 228
            T KQK +KISE K++TP++VLCK +P EF  Y  YC  L FE+ PDY YL++LFR LF +  +Q DY FDW VLK
Sbjct:  228 TLKQKCEKISEMKMTTPVDVLCKGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQHDYAFDWIVLK 302          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1G3_RAT (Casein kinase I isoform gamma-3 OS=Rattus norvegicus GN=Csnk1g3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKYP 234
            T K++Y KI + K +TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+G+ FDY +DW   + P
Sbjct:  256 TLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLP 332          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1G3_PONAB (Casein kinase I isoform gamma-3 OS=Pongo abelii GN=CSNK1G3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKYP 234
            T K++Y KI + K +TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+G+ FDY +DW   + P
Sbjct:  256 TLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLP 332          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1G3_MOUSE (Casein kinase I isoform gamma-3 OS=Mus musculus GN=Csnk1g3 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVLKYP 234
            T K++Y KI + K +TPIEVLC+++P E  +Y  Y R L F +KPDY YL++LF DLF R+G+ FDY +DW   + P
Sbjct:  256 TLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLP 332          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1G2_RAT (Casein kinase I isoform gamma-2 OS=Rattus norvegicus GN=Csnk1g2 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.198e-18
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDW 216
            T K++Y KI + K +TPIEVLC+S+P E  +Y  Y R L F +KPDY YL++LF DLF R G+ FDY +DW
Sbjct:  259 TLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDW 329          
The following BLAST results are available for this feature:
BLAST of CX294794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
DCO_DROME1.482e-2360.00Discs overgrown protein kinase OS=Drosophila melan... [more]
KIN20_CAEEL1.062e-2157.89Casein kinase I isoform delta OS=Caenorhabditis el... [more]
KC1_DICDI1.812e-2150.67Casein kinase I OS=Dictyostelium discoideum GN=cak... [more]
KC1A_CAEEL3.090e-2160.00Casein kinase I isoform alpha OS=Caenorhabditis el... [more]
HRR25_YEAST9.941e-2052.63Casein kinase I homolog HRR25 OS=Saccharomyces cer... [more]
KC1B_BOVIN1.298e-1957.33Casein kinase I isoform beta OS=Bos taurus GN=CSNK... [more]
KC1G3_RAT2.449e-1850.65Casein kinase I isoform gamma-3 OS=Rattus norvegic... [more]
KC1G3_PONAB2.449e-1850.65Casein kinase I isoform gamma-3 OS=Pongo abelii GN... [more]
KC1G3_MOUSE2.449e-1850.65Casein kinase I isoform gamma-3 OS=Mus musculus GN... [more]
KC1G2_RAT3.198e-1854.93Casein kinase I isoform gamma-2 OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionC05056A06SK PhIFruit1 Citrus clementina cDNA clone C05056A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294794 ID=CX294794; Name=CX294794; organism=Citrus clementina; type=EST; length=606bp
GGCACAAAAAAGCAAAAATATGATAAGATCAGCGAAAAGAAGGTGTCAAC
TCCGATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCATACT
TTCATTACTGTCGATCGTTGCGGTTTGAGGACAAACCAGATTATTCATAT
TTAAAGAGGCTTTTCCGCGACTTATTTATTCGAGAAGGTTTTCAGTTTGA
CTATGTATTTGATTGGACTGTATTAAAGTACCCTCAGATTGGTTCCAGCT
CTAAAGGAAGGCATTCCAGTGGGAAGGTAGGCTTAACCCCAGGACCATCT
GCTGAAAGACCAGAAAGGGGTTCAGTTGGGAAGGAGATTAGGGACAAATT
GTCTGGTGCAGTTGAAGCATTTTCAAGAAAAAATGCTGCTGGTACTCCTC
ATCGTGATCATCCCAGACACAAGAGTTCAGATGATGGTCCTTCATCTAAG
CATGTGAACCCTGATTCTGAAAAAGGACGAAGCTTTTCCCGGTATGGAAG
CACTTCAAGAAAAGCTGTAATCGCAAGCACTAAACCTGGTTCATCTGGTG
AATTCAGTGAGTGTCGCTCTAGCCGACTAGTCTCAAGCAGTGGCCGCTTG
TCTACC
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