CX294794

Overview
NameCX294794
Unique NameCX294794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC1G1_CHICK (Casein kinase I isoform gamma-1 OS=Gallus gallus GN=CSNK1G1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDW 216
            T K++Y KI + K +TP+EVLC+++P E  +Y  Y R L F ++PDY YL+ +F +LF ++G+ FDY +DW
Sbjct:  257 TLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDW 327          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: CKI3_SCHPO (Casein kinase I homolog 3 OS=Schizosaccharomyces pombe GN=cki3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVL 225
            T KQKY+KI EKK  TP++ LC+ YP EF+ Y  Y R+L +E+ PDY YL+ LF  L +R     D  +DWT+L
Sbjct:  228 TNKQKYEKIGEKKQVTPLKELCEGYPKEFLQYMIYARNLGYEEAPDYDYLRSLFDSLLLRINETDDGKYDWTLL 301          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: CKI1_SCHPO (Casein kinase I homolog 1 OS=Schizosaccharomyces pombe GN=cki1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVL 225
            T KQKY++I EKK STP+  LC  +P EF  Y HY R+L F+  PDY YL+ LF  +  R     D  FDW +L
Sbjct:  225 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 298          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: CKI2_SCHPO (Casein kinase I homolog 2 OS=Schizosaccharomyces pombe GN=cki2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.802e-14
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1
Query:   10 KQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTVL 225
            K KY+KISEKK ST I  LC  +P+EF  Y  Y RSL F+++PDY++L+ LF D+    G   D V+DW +L
Sbjct:  227 KHKYEKISEKKQSTSISELCAGFPNEFSKYMTYVRSLEFDEEPDYAFLQELFDDVLRANGDTNDGVYDWMLL 298          
BLAST of CX294794 vs. ExPASy Swiss-Prot
Match: KC11_ENCCU (Probable casein kinase I homolog ECU03_0910 OS=Encephalitozoon cuniculi GN=ECU03_0910 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query:    4 TKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGFQFDYVFDWTV 222
            TK++KYD+I E K S  +  LC   P E  S+  Y R+L +ED P+Y+YL+ L  D   + G + D VFDW V
Sbjct:  219 TKQEKYDRIRESKESISLYELCMGLPKEIHSFCFYVRNLGYEDMPNYAYLRTLLSDALRQRGLRSDGVFDWMV 291          
The following BLAST results are available for this feature:
BLAST of CX294794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KC1G1_CHICK1.755e-1646.48Casein kinase I isoform gamma-1 OS=Gallus gallus G... [more]
CKI3_SCHPO1.940e-1550.00Casein kinase I homolog 3 OS=Schizosaccharomyces p... [more]
CKI1_SCHPO2.145e-1448.65Casein kinase I homolog 1 OS=Schizosaccharomyces p... [more]
CKI2_SCHPO2.802e-1450.00Casein kinase I homolog 2 OS=Schizosaccharomyces p... [more]
KC11_ENCCU2.220e-1143.84Probable casein kinase I homolog ECU03_0910 OS=Enc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05056A06SK PhIFruit1 Citrus clementina cDNA clone C05056A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294794 ID=CX294794; Name=CX294794; organism=Citrus clementina; type=EST; length=606bp
GGCACAAAAAAGCAAAAATATGATAAGATCAGCGAAAAGAAGGTGTCAAC
TCCGATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCATACT
TTCATTACTGTCGATCGTTGCGGTTTGAGGACAAACCAGATTATTCATAT
TTAAAGAGGCTTTTCCGCGACTTATTTATTCGAGAAGGTTTTCAGTTTGA
CTATGTATTTGATTGGACTGTATTAAAGTACCCTCAGATTGGTTCCAGCT
CTAAAGGAAGGCATTCCAGTGGGAAGGTAGGCTTAACCCCAGGACCATCT
GCTGAAAGACCAGAAAGGGGTTCAGTTGGGAAGGAGATTAGGGACAAATT
GTCTGGTGCAGTTGAAGCATTTTCAAGAAAAAATGCTGCTGGTACTCCTC
ATCGTGATCATCCCAGACACAAGAGTTCAGATGATGGTCCTTCATCTAAG
CATGTGAACCCTGATTCTGAAAAAGGACGAAGCTTTTCCCGGTATGGAAG
CACTTCAAGAAAAGCTGTAATCGCAAGCACTAAACCTGGTTCATCTGGTG
AATTCAGTGAGTGTCGCTCTAGCCGACTAGTCTCAAGCAGTGGCCGCTTG
TCTACC
back to top