CX294798

Overview
NameCX294798
Unique NameCX294798
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10764 contig Ccv1_Contig10764:58..645. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  +G +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK10_DICDI (Probable cyclin-dependent kinase 10 OS=Dictyostelium discoideum GN=cdk10 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17
Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFNAPDGNSQPC 537
            +  +E L+ +G G Y  V KGR      IVALK+V   Q        ++ REI+ L+ +++ PN+V L E       D + LV E+L+ D+A++I    K           + EIK +++Q+L  V+  H + I+HRDLK  NLL G++G LKLADFG AR     +F  P  +  PC
Sbjct:    4 VLSFEKLDSIGEGTYGIVSKGRDKETGRIVALKKVKIGQQDKDGIPLTSLREIQILKEIKH-PNIVSLLEVVIGSTGDKIYLVFEYLEHDVASLIDNINKP--------FKLSEIKCFLLQLLRAVEYLHSHWIIHRDLKCSNLLYGNNGNLKLADFGLAR-----KFGYPIESITPC 167          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDKD1_ARATH (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17
Identity = 57/162 (35.19%), Postives = 93/162 (57.41%), Query Frame = 1
Query:   25 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 489
            ++  +Y   E +G G Y  V+K     +   VA+K++   +       +A REI+ L+ L++ P+++ L + F  + E+  +V EF++TDL  VI +            +S G++K ++  IL G++ CH   ++HRD+KP NLLIG +G LKLADFG ARI
Sbjct:    6 KVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKELKH-PHIIELIDAFPHK-ENLHIVFEFMETDLEAVIRDRNLY--------LSPGDVKSYLQMILKGLEYCHGKWVLHRDMKPNNLLIGPNGQLKLADFGLARI 157          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17
Identity = 63/157 (40.13%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            KYE LE +G G Y  V+K +    + IVALK V           SA REI  L+ L++  N+V LH+     D+   LV EF   DL        KK     +  +    +K +M Q+L G+  CH   ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     GI +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  +G +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17
Identity = 63/170 (37.06%), Postives = 89/170 (52.35%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSD-NLIVALKEVHDY-------QSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGE-------------IKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y+ +E +G G Y  VYK R L+  N IVALK++           +A REI  L+ + + PN+V L      +     LV EFL  DL   + E+    EGG  + +  G              +K++M Q++ G+  CH + ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    4 YQKIEKIGEGTYGVVYKARDLTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMHD-PNIVRLLNIVHADGHKLYLVFEFLDLDLKKYM-EALPVSEGGRGKALPDGSTLDMNRLGLGEAMVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGNLKLADFGLAR 171          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.936e-17
Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR  S   +VA+K++           +A RE+  LQ L++ PNVV L +   +E     L+ EFL  DL   +      +       +    +K ++ QIL G+  CHR  ++HRDLKP NLLI + GV+KLADFG +R
Sbjct:    4 YVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKH-PNVVRLLDVLMQESR-LYLIFEFLSMDLKKYLDSIPSGQY------MDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLSR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.936e-17
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR  +   +VA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL   +      +       +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDLKKYLDSIPPGQY------MDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.936e-17
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR  +   +VA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL   +            + +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:    4 YTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDLKKYLDSIPP------GQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 64/169 (37.87%), Postives = 88/169 (52.07%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH---DYQ----SAFREIEALQILQNSPNVVVLH--EYFWREDEDAV---------LVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQAR 486
            KYE LE VG G Y  VYK    +   +VALK+     D +    +A REI  LQ+L  S  +V L   E+  +  +  V         LV E+L TDL   I   +K   G   R +    ++R+M Q+  GV  CH + ++HRDLKP NLL+  D G+LK+AD G +R
Sbjct:    3 KYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDSTVSHSPKSNLYLVFEYLDTDLKKFIDSHRK---GSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSR 168          
The following BLAST results are available for this feature:
BLAST of CX294798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
CDK2_CRIGR1.135e-1739.10Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK10_DICDI1.135e-1736.52Probable cyclin-dependent kinase 10 OS=Dictyosteli... [more]
CDKD1_ARATH1.483e-1735.19Cyclin-dependent kinase D-1 OS=Arabidopsis thalian... [more]
CDK5_XENLA1.483e-1740.13Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDK2_MOUSE1.483e-1739.10Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDC2_AJECA1.483e-1737.06Cell division control protein 2 OS=Ajellomyces cap... [more]
CDC2_ORYCU1.936e-1737.82Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_HUMAN1.936e-1736.54Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_BOVIN1.936e-1736.54Cell division control protein 2 homolog OS=Bos tau... [more]
CKB12_ARATH2.529e-1737.87Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionC05056A11SK PhIFruit1 Citrus clementina cDNA clone C05056A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294798 ID=CX294798; Name=CX294798; organism=Citrus clementina; type=EST; length=588bp
AGCTGGAGCATCCATACCCGACCCGAGATCATTGCCAAATACGAAATCCT
CGAGTGCGTGGGCTCCGGCGCGTACTCCGACGTGTACAAGGGCCGGCGAT
TATCGGACAACCTGATCGTCGCGCTGAAGGAGGTCCACGACTACCAATCG
GCGTTCCGAGAAATCGAGGCGCTGCAGATCCTACAGAACTCGCCGAACGT
GGTGGTTTTGCACGAGTACTTTTGGCGGGAGGACGAGGACGCCGTGCTGG
TGCTGGAGTTTCTCAAGACCGATTTGGCGACGGTGATTGCGGAGTCCAAG
AAGAAGAGAGAGGGCGGGGGCGATCGTGGAATCAGCGTCGGTGAGATTAA
GAGATGGATGGTCCAGATTTTGTGTGGAGTGGACGCCTGTCACAGGAATA
CGATCGTTCATCGGGATTTGAAGCCTGGGAATTTGTTGATCGGCGATGAT
GGGGTTCTCAAGTTGGCCGATTTTGGCCAGGCAAGGATACTCCTGGGTAA
TGAATTCAATGCTCCTGATGGTAATTCTCAGCCTTGTGAATCCAATGCTC
CATATCAAGATAACATGTCTGAAGCTCCACAAGTTGAT
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