CX294798

Overview
NameCX294798
Unique NameCX294798
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10764 contig Ccv1_Contig10764:58..645. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 62/157 (39.49%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            KYE LE +G G Y  V+K +    + IVALK V           SA REI  L+ L++  N+V LH+     D+   LV EF   DL        KK     +  +    +K ++ Q+L G+  CH   ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 62/157 (39.49%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            KYE LE +G G Y  V+K +    + IVALK V           SA REI  L+ L++  N+V LH+     D+   LV EF   DL        KK     +  +    +K ++ Q+L G+  CH   ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 62/157 (39.49%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            KYE LE +G G Y  V+K +    + IVALK V           SA REI  L+ L++  N+V LH+     D+   LV EF   DL        KK     +  +    +K ++ Q+L G+  CH   ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK +      +VALK++  D ++      A REI  L+ L N PN+V L +    E++   LV EFL  DL       KK  +     G+ +  IK ++ Q+L G+  CH + ++HRDLKP NLLI  +G +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGLPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR  +   IVA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL   +            + +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:    4 YIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDLKKYLDSIPP------GQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRL---SDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            +A Y+ LE VG G Y  VYK   L       +VALK++           +A REI  L+ L++  N+V L++    +     LV EFL  DL   +    K +  G D       +K++M+Q+  G+  CH + I+HRDLKP NLLI  DG LKL DFG AR
Sbjct:    5 LANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDD-NIVRLYDIVHSDAHKLYLVFEFLDLDLKRYMEGIPKDQPLGADI------VKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGNLKLGDFGLAR 159          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK7_CARAU (Cell division protein kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.303e-17
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----------YQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            YE L+ +G G ++ VYK R  + N IVA+K++             ++A REI+ LQ L + PN++ L + F  +   ++L   F++TDL  +I ++           ++   IK +++  L G++  H + I+HRDLKP NLL+ ++GVLKLADFG A+
Sbjct:   12 YEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTALREIKLLQELSH-PNIIGLLDAFGHKSNISLLC--FMETDLEVIIKDTSLV--------LTPANIKAYILMSLQGLEYMHNHWILHRDLKPNNLLLDENGVLKLADFGLAK 159          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDKD3_ARATH (Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.313e-17
Identity = 58/162 (35.80%), Postives = 92/162 (56.79%), Query Frame = 1
Query:   25 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 489
            ++  +Y   E +G G Y  V+K         VA+K++   +       +A REI+ L+ L++ P++++L + F  + E+  LV EF++TDL  VI +S        +  +S  +IK +++    G+  CH   ++HRD+KP NLLIG DG LKLADFG ARI
Sbjct:    7 KVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELKH-PHIILLIDAFPHK-ENLHLVFEFMETDLEAVIRDS--------NIFLSPADIKSYLLMTFKGLAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARI 158          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.313e-17
Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLS-DNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGE--IKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ Y+  E VG G Y  VYK      +N +VALK++           +A REI  L+ +++  N+V L++    +     LV EFL  DL        KK      +G+ +G   IKR+M Q++ G+  CH + ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    4 LSDYQRQEKVGEGTYGVVYKALDTKHNNRVVALKKIRLESEDEGVPSTAIREISLLKEMKDD-NIVRLYDIIHSDSHKLYLVFEFLDLDL--------KKYMESIPQGVGLGANMIKRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGNLKLADFGLAR 156          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17
Identity = 62/157 (39.49%), Postives = 81/157 (51.59%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            KYE LE +G G Y  V+K +    + IVALK V           SA REI  L+ L++  N+V LH+     D+   LV EF   DL        KK     +  +    +K  + Q+L G+  CH   ++HRDLKP NLLI  +G LKLADFG AR
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149          
The following BLAST results are available for this feature:
BLAST of CX294798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
CDK5_MOUSE2.529e-1739.49Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN2.529e-1739.49Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN2.529e-1739.49Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDK2_RAT2.529e-1738.46Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDC2_RAT2.529e-1737.18Cell division control protein 2 homolog OS=Rattus ... [more]
CDC28_YEAST2.529e-1738.27Cell division control protein 28 OS=Saccharomyces ... [more]
CDK7_CARAU3.303e-1735.22Cell division protein kinase 7 OS=Carassius auratu... [more]
CDKD3_ARATH4.313e-1735.80Cyclin-dependent kinase D-3 OS=Arabidopsis thalian... [more]
CDC28_CANAL4.313e-1737.65Cell division control protein 28 OS=Candida albica... [more]
CDK5_RAT5.634e-1739.49Cell division protein kinase 5 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionC05056A11SK PhIFruit1 Citrus clementina cDNA clone C05056A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294798 ID=CX294798; Name=CX294798; organism=Citrus clementina; type=EST; length=588bp
AGCTGGAGCATCCATACCCGACCCGAGATCATTGCCAAATACGAAATCCT
CGAGTGCGTGGGCTCCGGCGCGTACTCCGACGTGTACAAGGGCCGGCGAT
TATCGGACAACCTGATCGTCGCGCTGAAGGAGGTCCACGACTACCAATCG
GCGTTCCGAGAAATCGAGGCGCTGCAGATCCTACAGAACTCGCCGAACGT
GGTGGTTTTGCACGAGTACTTTTGGCGGGAGGACGAGGACGCCGTGCTGG
TGCTGGAGTTTCTCAAGACCGATTTGGCGACGGTGATTGCGGAGTCCAAG
AAGAAGAGAGAGGGCGGGGGCGATCGTGGAATCAGCGTCGGTGAGATTAA
GAGATGGATGGTCCAGATTTTGTGTGGAGTGGACGCCTGTCACAGGAATA
CGATCGTTCATCGGGATTTGAAGCCTGGGAATTTGTTGATCGGCGATGAT
GGGGTTCTCAAGTTGGCCGATTTTGGCCAGGCAAGGATACTCCTGGGTAA
TGAATTCAATGCTCCTGATGGTAATTCTCAGCCTTGTGAATCCAATGCTC
CATATCAAGATAACATGTCTGAAGCTCCACAAGTTGAT
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