CX294798

Overview
NameCX294798
Unique NameCX294798
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10764 contig Ccv1_Contig10764:58..645. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 9.609e-17
Identity = 58/156 (37.18%), Postives = 81/156 (51.92%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR      IVA+K++           +A REI  L+ L++ PN+V L +    +D    L+ EFL  DL   +            + +    +K ++ QIL G+  CH   ++HRDLKP NLLI D G +KLADFG AR
Sbjct:    4 YIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRH-PNIVSLQDVLM-QDSRLYLIFEFLSMDLKKYLDSIPP------GQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK9_HUMAN (Cell division protein kinase 9 OS=Homo sapiens GN=CDK9 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16
Identity = 64/166 (38.55%), Postives = 89/166 (53.61%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++KYE L  +G G + +V+K R       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F + DLA +++    K         ++ EIKR M  +L G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK7_DICDI (Cell division protein kinase 7 OS=Dictyostelium discoideum GN=cdk7 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16
Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-----------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            KY I   +G G Y  V +    +   IVA+K++               SA REI+ LQ L++  NVV L + F  +  +  LV E ++ DL  VI +            +   +IK +M  +L G++ACHRN ++HRDLKP NLL+  +G LKLADFG AR
Sbjct:    3 KYNIEALIGEGTYGVVSRATVKATGQIVAIKKIRKILIQNQTDDGINFSAIREIKILQELKHD-NVVNLLDIFAHKS-NVYLVFELMQWDLQEVIEDKSII--------LKPADIKSYMKMLLQGIEACHRNWVLHRDLKPNNLLMSINGDLKLADFGLAR 153          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16
Identity = 60/156 (38.46%), Postives = 84/156 (53.85%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            Y  +E +G G Y  VYKGR  +   +VA+K++           +A REI  L+ LQ+ PNVV L +   +E +   LV EFL  DL   +            + +    +K ++ QIL G+  CH   ++HRDLKP NLLI + GV+KLADFG AR
Sbjct:    4 YLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKELQH-PNVVRLLDVLMQESK-LYLVFEFLSMDLKKYLDSIPS------GQFMDPMLVKSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNKGVIKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16
Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQAR 486
            +YE +E +G G Y  VYK R  + N  +ALK++   Q       +A REI  L+ +Q+  N+V L +    E     LV E+L  DL       KK  +   +      +IK ++ QILCG+  CH + ++HRDLKP NLLI      +KLADFG AR
Sbjct:    3 QYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHR-NIVRLQDVVHSEKR-LYLVFEYLDLDL-------KKFMDSSPEFAKDQRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLAR 151          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: BUR1_CANAL (Serine/threonine-protein kinase BUR1 OS=Candida albicans GN=CRK1 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16
Identity = 56/173 (32.37%), Postives = 89/173 (51.45%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS-------AFREIEALQILQNSPNVVVLHEYFWREDEDA------------VLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 501
            YE++E +G G +  V K +   D  +VA+K++ ++ +       A REI  L+ L N  N++ + +  + E + +              V  ++ +DL  ++   K K E        +G+IK  M Q+L G+   H    +HRD+K  N+LIG DGVLK+ADFG ARI  GN
Sbjct:   44 YEVIEKLGQGTFGVVQKAKSKKDGSLVAIKQLINHSAKEGFPITAMREITILKQL-NHKNILTIQDMIFEEPKMSNRTDIITMRGSFYTVTPYMSSDLVGLLENPKIKLE--------LGQIKCIMQQLLKGIQYVHNQKFLHRDIKAANILIGQDGVLKIADFGLARIYHGN 207          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.639e-16
Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 1
Query:   40 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++ +E +G G Y  VYK R      +VALK++  D ++      A REI  L+ L++ PN++ L +   RE +   +V EFL  DL       K+  +      + +  +K ++ Q+L GV  CH + ++HRDLKP NLL+   G +KLADFG AR
Sbjct:    4 FQKVEKIGEGTYGVVYKARNKVTGQLVALKKIRLDLEAEGVPSTAVREISLLKELKH-PNIIKLLDVVHREKK-LYMVFEFLTQDL-------KRHMDSSPTSELPLPVVKSYLAQLLEGVSFCHSHRVIHRDLKPQNLLLDGLGAIKLADFGLAR 150          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK9_CHICK (Cell division protein kinase 9 OS=Gallus gallus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 62/166 (37.35%), Postives = 90/166 (54.22%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            ++KYE L  +G G + +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F + DLA +++ +  K         ++ EIK+ M  +L G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   16 VSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNTHVK--------FTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 1
Query:   49 LECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 492
            LE +G G Y  VYKGR      +VA+K++           +A REI  L+ LQ+ PNVV L     +E+    L+ EFL  DL   +    K+        +    +K +  QIL  +  CH+  ++HRDLKP NLL+ + G +KLADFG AR +
Sbjct:   19 LEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQH-PNVVGLEAVIMQENR-LYLIFEFLSYDLKRYMDTLSKEEY------LPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADFGLARAI 165          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.796e-16
Identity = 53/160 (33.12%), Postives = 88/160 (55.00%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            I +YE +  V  G +  VY+G+    + IVALK +   +       +A REI  L    N PN+V + E     + D + + +EF++ D+ +++    ++     ++  S+GE K  + Q+L G++  H+  I+HRDLK  NLL+   G+LK+ADFG AR
Sbjct:  353 IDEYECVNRVDEGTFGVVYRGKDKRTDEIVALKRLKMEKEKEGFPITALREINMLLKAGNHPNIVNVKEILLGSNMDKIYMAMEFVEHDMKSLLDTMSRR-----NKRFSIGEQKTLLQQLLSGIEHMHKLWILHRDLKTSNLLMSHKGILKIADFGLAR 507          
The following BLAST results are available for this feature:
BLAST of CX294798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
CDC2_MOUSE9.609e-1737.18Cell division control protein 2 homolog OS=Mus mus... [more]
CDK9_HUMAN1.255e-1638.55Cell division protein kinase 9 OS=Homo sapiens GN=... [more]
CDK7_DICDI1.255e-1637.27Cell division protein kinase 7 OS=Dictyostelium di... [more]
CDC2_CARAU1.255e-1638.46Cell division control protein 2 homolog OS=Carassi... [more]
CDC22_MEDSA1.255e-1637.97Cell division control protein 2 homolog 2 OS=Medic... [more]
BUR1_CANAL1.255e-1632.37Serine/threonine-protein kinase BUR1 OS=Candida al... [more]
CDK3_MOUSE1.639e-1635.90Cell division protein kinase 3 OS=Mus musculus GN=... [more]
CDK9_CHICK2.141e-1637.35Cell division protein kinase 9 OS=Gallus gallus GN... [more]
CDC2_CAEBR2.141e-1636.77Cell division control protein 2 homolog OS=Caenorh... [more]
YP62_CAEEL2.796e-1633.13Putative serine/threonine-protein kinase B0495.2 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05056A11SK PhIFruit1 Citrus clementina cDNA clone C05056A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294798 ID=CX294798; Name=CX294798; organism=Citrus clementina; type=EST; length=588bp
AGCTGGAGCATCCATACCCGACCCGAGATCATTGCCAAATACGAAATCCT
CGAGTGCGTGGGCTCCGGCGCGTACTCCGACGTGTACAAGGGCCGGCGAT
TATCGGACAACCTGATCGTCGCGCTGAAGGAGGTCCACGACTACCAATCG
GCGTTCCGAGAAATCGAGGCGCTGCAGATCCTACAGAACTCGCCGAACGT
GGTGGTTTTGCACGAGTACTTTTGGCGGGAGGACGAGGACGCCGTGCTGG
TGCTGGAGTTTCTCAAGACCGATTTGGCGACGGTGATTGCGGAGTCCAAG
AAGAAGAGAGAGGGCGGGGGCGATCGTGGAATCAGCGTCGGTGAGATTAA
GAGATGGATGGTCCAGATTTTGTGTGGAGTGGACGCCTGTCACAGGAATA
CGATCGTTCATCGGGATTTGAAGCCTGGGAATTTGTTGATCGGCGATGAT
GGGGTTCTCAAGTTGGCCGATTTTGGCCAGGCAAGGATACTCCTGGGTAA
TGAATTCAATGCTCCTGATGGTAATTCTCAGCCTTGTGAATCCAATGCTC
CATATCAAGATAACATGTCTGAAGCTCCACAAGTTGAT
back to top