CX294798

Overview
NameCX294798
Unique NameCX294798
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.796e-16
Identity = 64/172 (37.21%), Postives = 94/172 (54.65%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGI--SVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFNAPDGN 525
            +Y   E +G G Y  V+K         VA+K++    Y+     +A REI+ L+ L++S N++ L + F  +  +  LV EF++TDL  VI           DR I  S  + K ++  +L G+  CH+  ++HRD+KP NLLIG DG LKLADFG ARI     F +P+ N
Sbjct:   18 RYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDS-NIIELIDAFPYKG-NLHLVFEFMETDLEAVIR----------DRNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARI-----FGSPERN 172          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 59/194 (30.41%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAF-REIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFNAPDGNSQPCESNAPYQDNMSEAPQVD 588
            I +Y+I++ +G G++  V   + +     VALK ++       D Q    REI  L++L++ P+++ L++    +DE  ++V+EF   +L   I +  K  E          E +R+  QI+  V+ CHR+ IVHRDLKP NLL+ D   +K+ADFG + I+    F      S    +       +   P+VD
Sbjct:   49 IGRYQIIKTLGEGSFGKVKLAQHVGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRH-PHIIKLYDVIKSKDE-IIMVIEFAGKELFDYIVQRGKMPED---------EARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 231          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: NUAK2_PONAB (NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=NUAK2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 1
Query:   13 HTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVA-------LKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFL-KTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 507
            H +  +  +YE LE +G G Y  V K R  S  L+         +K+  D     REIE +  L N P+++ +HE F       V+V+E+  + DL   I+E ++         +S  E + +  QI+  V  CH+N +VHRDLK  N+L+  +G +K+ADFG + +    +F
Sbjct:   44 HHKHNLRHRYEFLETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLMHIRREIEIMSSL-NHPHIIAIHEVF-ENSSKIVIVMEYASRGDLYDYISERQQ---------LSEREARHFFRQIVSAVHYCHQNRVVHRDLKLENILLDANGNIKIADFGLSNLYHQGKF 205          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: NUAK2_HUMAN (NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=NUAK2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 1
Query:   13 HTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVA-------LKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFL-KTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 507
            H +  +  +YE LE +G G Y  V K R  S  L+         +K+  D     REIE +  L N P+++ +HE F       V+V+E+  + DL   I+E ++         +S  E + +  QI+  V  CH+N +VHRDLK  N+L+  +G +K+ADFG + +    +F
Sbjct:   44 HHKHNLRHRYEFLETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLMHIRREIEIMSSL-NHPHIIAIHEVF-ENSSKIVIVMEYASRGDLYDYISERQQ---------LSEREARHFFRQIVSAVHYCHQNRVVHRDLKLENILLDANGNIKIADFGLSNLYHQGKF 205          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CRK1_SCHPO (Serine/threonine-protein kinase crk1 OS=Schizosaccharomyces pombe GN=crk1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:   58 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            VG G Y+ V+ GR+   N  VA+K++   Q       SA REI+ L+  ++  NV+ L + F  +  +  ++LEFL +DL  +I +                 IK WMV +L G+   H   I+HRDLKP NLLI  DGVLKLADFG +R
Sbjct:   17 VGEGTYAVVFLGRQKETNRRVAIKKIKVGQFKDGIDISALREIKFLRESRHD-NVIELVDVFSTKS-NLNIILEFLDSDLEMLIKDKFIV--------FQPAHIKSWMVMLLRGLHHIHSRFILHRDLKPNNLLISSDGVLKLADFGLSR 156          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 65/171 (38.01%), Postives = 89/171 (52.05%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH---DYQ----SAFREIEALQILQNSPNVVVLH--EYFWREDEDAV-LVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFNAP 516
            KYE LE VG G Y  VYK +  +   +VALK+     D +    +A REI  L++L  S  VV L   E   +  +  + LV EFL TDL   +   +K   G   R +    IK ++ Q+  GV  CH + ++HRDLKP NLL+  + G+LK+AD G     LG  F  P
Sbjct:    3 KYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQATKNGKPVLYLVFEFLDTDLKKFVDAYRK---GPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLG-----LGRAFTVP 165          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 64/172 (37.21%), Postives = 94/172 (54.65%), Query Frame = 1
Query:   37 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--DYQ-----SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGI--SVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFNAPDGN 525
            +Y   E +G G Y  V+K         VA+K++    Y+     +A REI+ L+ L++S N++ L + F  +  +  LV EF++TDL  VI           DR I  S  + K ++  +L G+  CH+  ++HRD+KP NLLIG DG LKLADFG ARI     F +P+ N
Sbjct:   18 RYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDS-NIIELIDAFPYKG-NLHLVFEFMETDLEAVIR----------DRNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARI-----FGSPERN 172          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK9_RAT (Cell division protein kinase 9 OS=Rattus norvegicus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 63/166 (37.95%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            + KYE L  +G G + +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F + DLA +++    K         ++ EIKR M  +L G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   16 VTKYEKLAKIGQGTFGEVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK9_MOUSE (Cell division protein kinase 9 OS=Mus musculus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 63/166 (37.95%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            + KYE L  +G G + +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F + DLA +++    K         ++ EIKR M  +L G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   16 VTKYEKLAKIGQGTFGEVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
BLAST of CX294798 vs. ExPASy Swiss-Prot
Match: CDK9_BOVIN (Cell division protein kinase 9 OS=Bos taurus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 63/166 (37.95%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   31 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPNVVVLHEY-------FWREDEDAVLVLEFLKTDLATVIAESKKKREGGGDRGISVGEIKRWMVQILCGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 486
            + KYE L  +G G + +V+K +       VALK+V           +A REI+ LQ+L++  NVV L E        + R      LV +F + DLA +++    K         ++ EIKR M  +L G+   HRN I+HRD+K  N+LI  DGVLKLADFG AR
Sbjct:   16 VTKYEKLAKIGQGTFGEVFKAKHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172          
The following BLAST results are available for this feature:
BLAST of CX294798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
CDKD1_ORYSI2.796e-1637.21Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
SNF1_CANTR3.652e-1630.41Carbon catabolite-derepressing protein kinase OS=C... [more]
NUAK2_PONAB3.652e-1631.79NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=... [more]
NUAK2_HUMAN3.652e-1631.79NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=... [more]
CRK1_SCHPO3.652e-1639.33Serine/threonine-protein kinase crk1 OS=Schizosacc... [more]
CKB11_ORYSJ3.652e-1638.01Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CDKD1_ORYSJ3.652e-1637.21Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDK9_RAT3.652e-1637.95Cell division protein kinase 9 OS=Rattus norvegicu... [more]
CDK9_MOUSE3.652e-1637.95Cell division protein kinase 9 OS=Mus musculus GN=... [more]
CDK9_BOVIN3.652e-1637.95Cell division protein kinase 9 OS=Bos taurus GN=CD... [more]

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Properties
Property NameValue
Genbank descriptionC05056A11SK PhIFruit1 Citrus clementina cDNA clone C05056A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294798 ID=CX294798; Name=CX294798; organism=Citrus clementina; type=EST; length=588bp
AGCTGGAGCATCCATACCCGACCCGAGATCATTGCCAAATACGAAATCCT
CGAGTGCGTGGGCTCCGGCGCGTACTCCGACGTGTACAAGGGCCGGCGAT
TATCGGACAACCTGATCGTCGCGCTGAAGGAGGTCCACGACTACCAATCG
GCGTTCCGAGAAATCGAGGCGCTGCAGATCCTACAGAACTCGCCGAACGT
GGTGGTTTTGCACGAGTACTTTTGGCGGGAGGACGAGGACGCCGTGCTGG
TGCTGGAGTTTCTCAAGACCGATTTGGCGACGGTGATTGCGGAGTCCAAG
AAGAAGAGAGAGGGCGGGGGCGATCGTGGAATCAGCGTCGGTGAGATTAA
GAGATGGATGGTCCAGATTTTGTGTGGAGTGGACGCCTGTCACAGGAATA
CGATCGTTCATCGGGATTTGAAGCCTGGGAATTTGTTGATCGGCGATGAT
GGGGTTCTCAAGTTGGCCGATTTTGGCCAGGCAAGGATACTCCTGGGTAA
TGAATTCAATGCTCCTGATGGTAATTCTCAGCCTTGTGAATCCAATGCTC
CATATCAAGATAACATGTCTGAAGCTCCACAAGTTGAT
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