CX294799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.804e-11 Identity = 36/117 (30.77%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 260 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN-----IRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 V+ +++ ++FDE+P+ NV+S + +I + Y+EA+ LF M L +RP+EFT +V+ + L L GK +HA+ K ++ ++ +G+A++D+Y K S+E Sbjct: 135 VNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.804e-11 Identity = 35/104 (33.65%), Postives = 65/104 (62.50%), Query Frame = 2 Query: 293 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN--IRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 + QVFD++P ++VS T+II R+ ++ +EA+ LFS M +++ + P V+ + ++ G+ LHA+A K L S+V+VGS++LD+Y ++ I++ Sbjct: 58 AARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDK 161
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.662e-11 Identity = 33/119 (27.73%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 242 AIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 A T +S S S + + H++FDE+PD +VV+ T + + + EAI LF +M+ + ++P + V+ + + DL+ G+ + + ++ +Q N FV + +++LY K +E+ Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 33/108 (30.56%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 278 SDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQ-SNVFVGSAILDLYIKLSSIEE 598 SD H+VFDE+PD +V+S +++ + + ++E I LF + ++ P+EF+F + + + L LG +H+ K+GL+ NV VG+ ++D+Y K +++ Sbjct: 103 SDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDD 210
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 38/132 (28.79%), Postives = 73/132 (55.30%), Query Frame = 2 Query: 209 QKASVQKLETPA----IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSI 592 +K Q ++ P+ + T + ++ + S H+VF+++ NVV T++I + K EE + LF+RM N+ +E+T+G++I + T L L+ GK H K G++ + + +++LD+Y+K I Sbjct: 162 KKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 266 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 CGS QV+D +P+L+ VS +++I +++ ++ LF M++ F S++ ++ ++ +LG Q+HA+ TK+GL + VGS++L +Y K SI++ Sbjct: 599 CGS----LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.246e-11 Identity = 32/102 (31.37%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 290 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 595 + +VFD +P+ ++VS TI+ +++ A+ + M N++PS T SV+P+ +AL +++GK++H +A + G S V + +A++D+Y K S+E Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.246e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 302 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEE 598 +VFD+ N+ TTI+ + + +EEA+ LFS+M + P+E+TF ++ S L L G LH K G +++V VG+A++++Y K SIE+ Sbjct: 293 RVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
BLAST of CX294799 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.246e-11 Identity = 30/110 (27.27%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 251 TDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIK 580 T + S + QVFD++P + II +++ +H+++A+ ++S M L + P FTF ++ + + L L +G+ +HA ++G ++VFV + ++ LY K Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166 The following BLAST results are available for this feature:
BLAST of CX294799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294799 ID=CX294799; Name=CX294799; organism=Citrus clementina; type=EST; length=600bpback to top |