CX294803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 4.324e-26 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = -2 Query: 230 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKD 547 TGKHGHAK H V IDIF GKKLED+ PS+HN +VP V R +YQL+DI +DGF+SL+ +G+TKDD++ P E L ++ F+ GKDL+V++ AMGEE + K+ Sbjct: 49 TGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 7.376e-26 Identity = 57/106 (53.77%), Postives = 79/106 (74.53%), Query Frame = -2 Query: 230 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKD 547 TGKHGHAK H V +DIF GKKLED+ PS+HN +VP V R++YQL+DI +DG++SL+T +G TKDD++ P E L ++ F+ GKDL+V++ AMGEE + K+ Sbjct: 49 TGKHGHAKVHLVTLDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAPEGE-LGDSMQAAFDEGKDLMVTIISAMGEEAAISFKE 152
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.146e-25 Identity = 56/105 (53.33%), Postives = 80/105 (76.19%), Query Frame = -2 Query: 233 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++SG++++++V AM EE A+K Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 8.155e-25 Identity = 55/105 (52.38%), Postives = 79/105 (75.24%), Query Frame = -2 Query: 233 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 8.155e-25 Identity = 55/105 (52.38%), Postives = 79/105 (75.24%), Query Frame = -2 Query: 233 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 8.155e-25 Identity = 55/105 (52.38%), Postives = 79/105 (75.24%), Query Frame = -2 Query: 233 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 8.155e-25 Identity = 55/105 (52.38%), Postives = 79/105 (75.24%), Query Frame = -2 Query: 233 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.817e-24 Identity = 55/105 (52.38%), Postives = 78/105 (74.29%), Query Frame = -2 Query: 233 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G +DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.099e-24 Identity = 60/110 (54.55%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAK H V IDIF GKKLED+ PS+HN DVP+V RTDYQ I ED F+ L+ NG K D+++P E L +I+ E GKD V VQ AMGEE +K+ K Sbjct: 55 TGKHGHAKVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNK 162
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A1_CHICK (Eukaryotic translation initiation factor 5A-1 OS=Gallus gallus GN=EIF5A1 PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 3.788e-22 Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = -2 Query: 281 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLV 547 TGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DGF+SLL ++G ++DLRLP E L +I+ ++ G++++ Sbjct: 48 TGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLPEGE-LGREIEQKYDCGEEII 134 The following BLAST results are available for this feature:
BLAST of CX294803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294803 ID=CX294803; Name=CX294803; organism=Citrus clementina; type=EST; length=548bpback to top |