CX294912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 198 PS D A R+PG+G+ TNI+NGGIECG G +S VA+RIGF+ +C G+ G+NLDCY+Q P+ Sbjct: 253 PSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGW-NSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNL 210 PSA D+ A R+PGYG+ TNIINGGIECG+G N+ +RIGF+ +C G G NLDCY Q P+G L Sbjct: 264 PSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 198 PS D A R+PG+G+ TNIINGGIECG G +S VA+RIGF+ +C G+ G+NLDCY+Q P+ Sbjct: 201 PSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16 Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 225 PS D +A RLPG+G+ TNIINGG+ECGKG V +RIGF+ +C + G+NLDC NQ P+G L+ ++ Sbjct: 241 PSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 198 PS D A R+PG+G+ TNI+NGGIECG G +S VA+RIGF+ +C + G+NLDCYNQ P+ Sbjct: 256 PSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15 Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 189 PSA D A R+PGYG+ TNIINGGIECG G N +RIG++ +C G G NLDCYNQ Sbjct: 195 PSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQ 256
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.029e-15 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 189 PS D A+R+PGYG+ TNIINGG+EC G N+ V +RIGF+ +CG + G+NLDC NQ Sbjct: 186 PSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQ 247
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.671e-14 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVA-NRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 201 PS +D ++ RLPGYG+ TNIINGG ECGKG+++ A +R+G++ +C F + GDN+ C +Q PYG Sbjct: 188 PSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14 Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 189 PS D A+R+PGYG+ TNIING ECG G N+ +RIGF+ +CG + G+NLDC NQ Sbjct: 186 PSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQ 247
BLAST of CX294912 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 4 PSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPY 198 PS+ D A R+PGYG+ TNII+GG+ECGKG S VA+RIG++ DNLDCYNQ P+ Sbjct: 146 PSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199 The following BLAST results are available for this feature:
BLAST of CX294912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294912 ID=CX294912; Name=CX294912; organism=Citrus clementina; type=EST; length=431bpback to top |