CX294954

Overview
NameCX294954
Unique NameCX294954
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:849..1444. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 132.494 bits (332), Expect = 1.563e-30
Identity = 71/147 (48.30%), Postives = 96/147 (65.31%), Query Frame = 1
Query:   16 LAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 450
            L++++V  EG LLKP+MVT G   K K TP+++A  T++ L R +P AV G+ FLSGGQSE EAT+NL+A+N  P   PW ++FSY RALQ + L+ W G+ EN+ A Q+ LL RAKAN  A  GKY   G +      +FV  + Y
Sbjct:  217 LSDHHVYLEGTLLKPNMVTAGQSAK-KNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.757e-30
Identity = 70/146 (47.95%), Postives = 96/146 (65.75%), Query Frame = 1
Query:   22 ENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 450
            +++V  EG LLKP+MVTPG  C  K + ++VA  T+  L R +PPAV G+ FLSGGQSE EA++NL+A+N  +   PW ++FS+ RALQ + LKTW G+ EN  AA +  + RA+ NSLA  GKYT  G+S  A     ++  Y Y
Sbjct:  219 DHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.482e-28
Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 1
Query:    7 FLLLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 396
            F  L E NV+ EG +LK SMV PG +C+E+A+  +VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  203 FNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.482e-28
Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 1
Query:    7 FLLLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 396
            F  L E NV+ EG +LK SMV PG +C+E+A+  +VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  203 FNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQLDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.582e-25
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:   25 NNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPE 318
            +N+  EG LLKP+MVT G  C +K TP+ +A  T+  L+R +P AV GI FLSGGQSE +AT+NLNA+NQ  G  PW ++FSY RALQ + LK WGG+ E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.405e-25
Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 1
Query:    7 FLLLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 396
            F  L E NV+ EG +LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LN M+Q G  PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  203 FGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.513e-25
Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 1
Query:    7 FLLLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 396
            F  L E NV+ EG +LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LN M+Q G  PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  203 FGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CX294954 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.215e-18
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   31 VMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLL 348
            V   G+L+K S VT G    EK TP++VA +TL+ L   IP  +PGI+FLSGG    +A   LNA+N  +G   W +SFS+ARAL +  L+TW G   N++ AQ  LL
Sbjct:  213 VYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CX294954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_DROME1.563e-3048.30Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDCA_DANRE7.757e-3047.95Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF1_XYLFT9.482e-2849.24Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA9.482e-2849.24Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_LYMST2.582e-2556.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF1_XANAC4.405e-2546.97Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP7.513e-2546.97Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ENCCU5.215e-1846.30Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC05065A05SK DroRLeaf1 Citrus clementina cDNA clone C05065A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294954 ID=CX294954; Name=CX294954; organism=Citrus clementina; type=EST; length=596bp
GAGGGTTTTCTTCTCCTTGCTGAGAACAATGTCATGTTTGAGGGTATTCT
CCTCAAGCCTAGCATGGTCACTCCTGGTGCTGAATGCAAGGAGAAGGCCA
CACCACAACAGGTTGCTGAGTACACACTCAAGCTCCTTCACAGGAGAATC
CCTCCAGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGGCAATCTGAGGT
TGAGGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGC
ACGTATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACA
TGGGGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCAC
CCGTGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGG
GAGAATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTAC
TAAATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATGA
GTAGTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTAT
TTTTGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTT
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