CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOTH (Spermidine synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=speE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.550e-14 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 210 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 ++F P + K K+ L K+EYQE+ V E+ +G++L+LDGI+Q T DE Y EMIAH+PL + +PK REI +H S+E +CE Sbjct: 3 LWFTEYQTPTLGITCKTKKTLHSEKTEYQELAVIETEQFGRMLLLDGIIQTTVADEFVYHEMIAHVPLFTHKNPKKALVVGGGDGGSIREIVKHPSIEKAVLCE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ENT38 (Spermidine synthase OS=Enterobacter sp. (strain 638) GN=speE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.288e-13 Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 219 NNPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +N +W H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH S+E I + E Sbjct: 3 DNTVWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVSRHKSIETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALTY (Spermidine synthase OS=Salmonella typhimurium GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALTI (Spermidine synthase OS=Salmonella typhi GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALSV (Spermidine synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALPK (Spermidine synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALPC (Spermidine synthase OS=Salmonella paratyphi C (strain RKS4594) GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALPB (Spermidine synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALPA (Spermidine synthase OS=Salmonella paratyphi A GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SALNS (Spermidine synthase OS=Salmonella newport (strain SL254) GN=speE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.197e-13 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE++RH +VE I + E Sbjct: 4 NTMWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVE 108 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |