CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ALKMQ (Spermidine synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=speE PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13 Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 249 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S KVKE LF +SE+Q+V V ++ +GK++ LDG+V +TEKDE Y +MI H+P+ P+ K RE+ R+ S++ +D+ E Sbjct: 16 SFKVKEHLFSEQSEFQKVDVLDTYEFGKLMTLDGLVMVTEKDEFIYHDMIVHVPMAVNPNIKNVLIIGGGDGGTARELMRYQSIKHVDMVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_THEP1 (Spermidine synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=speE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 252 LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +K+ +++ G+S+ Q + +FE+ G V LDGI TEKDE Y EM+AH+P+ P+PK RE+ +HDSVE +CE Sbjct: 32 MKINRMIYSGQSDIQRIDIFENPDLGVVFSLDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAVLCE 121
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CALS8 (Spermidine synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=speE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13 Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 210 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVE 503 ++F P + K+ + ++ K++YQ++ + E+ +GK+LVLDG VQ T DE Y E+IAH+PL + P+PK REI +H+ VE Sbjct: 6 LWFTEQQTPDLGFTCKITKTIYTAKTKYQDLAILETKQFGKMLVLDGAVQTTIVDEFCYHELIAHVPLFTHPNPKKVAVIGGGDGGVIREILKHEEVE 103
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ANATD (Spermidine synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=speE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13 Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 210 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVE 503 ++F P + K+ + ++ K++YQ++ + E+ +G++LVLDG VQ T DE Y E+I+H+PL + P+PK REI +HD VE Sbjct: 6 LWFTEQQTPDLGFTCKITKTIYTAKTQYQDLAILETKQFGRMLVLDGAVQTTIADEFCYHELISHVPLFTHPNPKKVAVIGGGDGGVIREILKHDEVE 103
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERPP (Spermidine synthase OS=Yersinia pestis (strain Pestoides F) GN=speE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERPN (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=speE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERPG (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=speE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERPE (Spermidine synthase OS=Yersinia pestis GN=speE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_YERPA (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=speE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13 Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH ++E I + E Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SERP5 (Spermidine synthase OS=Serratia proteamaculans (strain 568) GN=speE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13 Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 258 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K RE+SRH VE I + E Sbjct: 21 VENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHQGVEQITMVE 108 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |