CX294964

Overview
NameCX294964
Unique NameCX294964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC2_MEDTR (Truncated lectin 2 OS=Medicago truncatula GN=LEC2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15
Identity = 77/249 (30.92%), Postives = 111/249 (44.58%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPT-----EXXXXXXXXXXXXXXXXAVELDTYKNDYWSDPDAN------HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQK--LIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SFS + F P      +LI  G A T S G L L+               +GR LYS P+  W       A   TTFT  I+  PNT + ADG+ F  A  DT P +                      AVE+DT+ N  W     N      H+GID+     N  KS+ +    L++ +   V I ++G T +L V V Y   PL +   +   + L + +P  V +GF++STG ++S +H +L W+F
Sbjct:   31 SFSITKFVP---DQKNLIFQGDAKTASTGKLELSKAVK---------NSIGRALYSAPIHIWDSKTGSVANFQTTFTFTITA-PNTYNVADGLAFFIAPIDTKPKSIHHGGYLGVFDSKTYKKSIQTVAVEIDTFYNAQWDPNPGNISSTGRHIGIDV-----NSIKSISTVPWSLENNKKANVAIGFNGATNVLSVDVEY---PLIRHYTLSHVVPLKDVVPEWVRIGFSSSTGAEYS-AHDILSWSF 257          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: PHAL_PHAVU (Leucoagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=DLEC2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 68/239 (28.45%), Postives = 101/239 (42.26%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX--AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFS--ESHQVLDWTF 692
            + F+F  FN  +     ++   A   S G L LT+      P    +  +GR  YS P+  W       A  +T+FT  I   PN    ADG+ F      S P +                  AVE DT  N  W DP   H+GID+     N  +S+ ++  D  +G   +V I YD  T +L   + Y       ++   + L   +P  V VGF+A+TG +    E++ VL W+F
Sbjct:   24 IYFNFQRFNETNL----ILQRDASVSSSGQLRLTNLNGNGEPR---VGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQ-VPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPTERHIGIDV-----NSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 248          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_VICFA (Favin OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 73/239 (30.54%), Postives = 104/239 (43.51%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SFS   F P      +LI  G    +   L+LT               VGR LYS P+  W       A  +TTF   I   PN  + ADG TF  A  DT P T                    AVE DT+ N  W   +   H+GID+     N  KS+ +   +L++G    V I ++  T +L V + Y  N     +   + L + +P  V +GF+A+TG +++ +H+VL WTF
Sbjct:    6 SFSIPKFRP---DQPNLIFQGGGYTTKEKLTLTKAVK---------NTVGRALYSLPIHIWDSETGNVADFTTTFIFVIDA-PNGYNVADGFTFFIAPVDTKPQTGGGYLGVFNGKDYDKTAQTVAVEFDTFYNAAWDPSNGKRHIGIDV-----NTIKSISTKSWNLQNGEEAHVAISFNATTNVLSVTLLYP-NLTGYTLSEVVPLKDVVPEWVRIGFSATTGAEYA-THEVLSWTF 224          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_ERYCO (Lectin OS=Erythrina corallodendron PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 68/244 (27.87%), Postives = 98/244 (40.16%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGP--DFSESHQVLDWTFTRS 701
            +SFSFS F P +  D   +   A+    G L LT       P        GR LY++PV  W       A   T F+  I         ADG+ F      S P +                     VE DT+ N  W  P   H+GID+     N  +S+ +    L +G+   V I YD  +KIL+  + Y  +     I   + + + +P  V VG + +TG   D +E+H V  W+F  S
Sbjct:   30 ISFSFSEFEPGN--DNLTLQGAALITQSGVLQLTKINQNGMP---AWDSTGRTLYAKPVHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDNSYQTLGVEFDTFSNP-WDPPQVPHIGIDV-----NSIRSIKTQPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQAS 262          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC2_CYTSC (2-acetamido-2-deoxy-D-galactose-binding seed lectin 2 OS=Cytisus scoparius PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 77/248 (31.05%), Postives = 111/248 (44.76%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPN-TTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAY-AGNPLQK---LIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 692
            +SFSF+ F  K+     ++   A+    G L LT+  + +         +GR LYS P+  W       A  +T F+  IS  PN +T + DG+ F  A  DT P +                     AVE DTY N  W DP  N H+GID+     N  KS   S    K+G    V I Y   +K L   + Y +G    K   +I   + L  T+P  V +GF+A+TG   ++ E+H +L W+F
Sbjct:    4 LSFSFTKF--KTDQKNLILQRDALITPTGKLQLTTVENGKPAAY----SLGRALYSTPIHIWDKSTGDEASFATFFSFVISDAPNPSTAATDGLAFFLAPADTQPQSAGGYLGLFEKDSSYNSSNQIVAVEFDTYYNSAW-DPQTNPHIGIDV-----NTIKSKKVSSWGFKNGNVATVLITYQPSSKSLVASLVYPSGQTSDKTSYIISANVDLKATVPEWVRIGFSATTGQTDNYIETHDILSWSF 239          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC1_CYTSE (Anti-H(O) lectin 1 OS=Cytisus sessilifolius PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 69/247 (27.94%), Postives = 106/247 (42.91%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSY-GYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTE------XXXXXXXXXXXXXXXXAVELDTYKNDYWS--DPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFT 695
            +SF+F  F P   +  +++  G  + S  G L +T    P +      + +GR LY+ PV  W       A   T+F+  +   P  ++  DG+TF  A   S                          AVE DTY    ++  DPD  H+G+D+     N  KS+ +   D ++G    V I Y   TK L V ++Y  +    ++   + L   +P  V VGF+A  G   +F E+H VL W FT
Sbjct:    5 LSFNFDKFVP---NQNNILFQGEASVSTTGVLQVTKVSKPAT------RSIGRALYAAPVHIWDSTTGRVASFETSFSFVVKDEPEKSNGVDGLTFFLAPANSQIPSGSSAGLFGLFNSSDNKSSNQIIAVEFDTYFGKTYNPWDPDFKHIGVDV-----NSIKSIKTVKWDWRNGEVANVVITYRAPTKSLTVSLSYPSDQTSNIVTASVDLKAILPEWVSVGFSAGVGNAAEF-ETHDVLSWYFT 236          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_LENCT (Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 74/245 (30.20%), Postives = 109/245 (44.49%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SFS + F+P      +LI  G    + G L+LT               VGR LYS P+  W       A   T+FT  I   P++ + ADG TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+++   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   35 SFSITKFSP---DQQNLIFQGDGYTTKGKLTLTKAVK---------STVGRALYSTPIHIWDRDTGSVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_LENCC (Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 74/245 (30.20%), Postives = 109/245 (44.49%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SFS + F+P      +LI  G    + G L+LT               VGR LYS P+  W       A   T+FT  I   P++ + ADG TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+++   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   35 SFSITKFSP---DQKNLIFQGDGYTTKGKLTLTKAVK---------STVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_PEA (Lectin OS=Pisum sativum GN=LECA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 3
Query:  153 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            VGR LYS P+  W       A   T+FT  I+  PN+ + ADG TF  A  DT P T                    AVE DT+ N  W   + + H+GID+     N  KS+++    L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +++ +H+VL W+F
Sbjct:   71 VGRALYSSPIHIWDRETGNVANFVTSFTFVINA-PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDV-----NSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNSLEEENVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYA-AHEVLSWSF 259          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_LENCO (Lectin OS=Lens culinaris subsp. orientalis PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 74/245 (30.20%), Postives = 108/245 (44.08%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SFS + F+P      +LI  G    + G L+LT               VGR LYS P+  W       A   T+FT  I   P++ + ADG TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+ +   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   35 SFSITKFSP---DQQNLIFQGDGYTTKGKLTLTKAVK---------STVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVSTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
The following BLAST results are available for this feature:
BLAST of CX294964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
LEC2_MEDTR1.172e-1530.92Truncated lectin 2 OS=Medicago truncatula GN=LEC2 ... [more]
PHAL_PHAVU3.410e-1528.45Leucoagglutinating phytohemagglutinin OS=Phaseolus... [more]
LEC_VICFA3.410e-1530.54Favin OS=Vicia faba PE=1 SV=1[more]
LEC_ERYCO4.453e-1527.87Lectin OS=Erythrina corallodendron PE=1 SV=3[more]
LEC2_CYTSC5.816e-1531.052-acetamido-2-deoxy-D-galactose-binding seed lecti... [more]
LEC1_CYTSE5.816e-1527.94Anti-H(O) lectin 1 OS=Cytisus sessilifolius PE=1 S... [more]
LEC_LENCT7.596e-1530.20Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV... [more]
LEC_LENCC7.596e-1530.20Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=... [more]
LEC_PEA9.921e-1531.12Lectin OS=Pisum sativum GN=LECA PE=1 SV=1[more]
LEC_LENCO9.921e-1530.20Lectin OS=Lens culinaris subsp. orientalis PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC05065B03SK DroRLeaf1 Citrus clementina cDNA clone C05065B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294964 ID=CX294964; Name=CX294964; organism=Citrus clementina; type=EST; length=717bp
GAGGTGTTAGCTTCTCATTTTCCTCATTCAACCCAAAAAGTTGTAGCGAT
GGCAGCCTAATTTGCATGGGCGCAGTGACTCCAAGTTATGGCTACTTGAG
CCTCACATCAGACCCTTCACCAGAATCGCCAGATCAGCTGCCGCTAAAAA
AGGTTGGACGGGTTTTATACAGCCAGCCTGTGACTGCATGGCCAGCTATG
ATTAGTACCACCTTCACCATTAGGATCTCACCCTACCCAAATACAACGGA
TTCTGCAGATGGCATGACGTTTGTTTTTGCAACCGATACCAGCCCTCCAA
CTGAAAACTCCGCCGGCGGAAATCTTGGACTGAGTAACGGTGTTTCGCAA
TTAGCCGTGGAGCTGGACACTTACAAGAACGACTACTGGTCTGATCCAGA
TGCTAACCATATGGGCATTGACATAGCAAACTTAACATCGAATCCAGCCA
AGAGTCTCGACAGCTCTGGTATTGATCTCAAAAGTGGAAGACCGATCCAG
GTTCACATTTATTACGATGGATGGACGAAAATACTCTATGTTTATGTGGC
ATATGCGGGGAACCCACTTCAGAAGCTTATTGAAAGACCTATCCTCTTGT
CAGAAACAATTCCAAGCTCAGTCTATGTTGGCTTCACAGCATCCACAGGG
CCCGACTTTTCAGAAAGCCATCAGGTGCTTGATTGGACCTTCACACGTTC
CCATTGCCTTCTTCTCT
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