CX294964

Overview
NameCX294964
Unique NameCX294964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig651 contig Ccv1_Contig651:124..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LCB2_ROBPS (Bark agglutinin I polypeptide B OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPL-KKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 692
            +SFSF  F  K      +    A+  S G L LT+       D  P+   +GRVLY+ P   W       A   T+F+  I   PN   +ADG+ F  A   ++ P +                    AVE DT++N  W DP+  HMGID+     N  +S+ +   D  +G    V I Y+  TK L   + Y       ++   + L + +P  V VGFTA+TG   D+ +++ VL W+F
Sbjct:   35 LSFSFPKF--KHSQPDLIFQSDALVTSKGVLQLTT-----VNDGRPVYDSIGRVLYAAPFQIWDSTTGNVASFVTSFSFIIKA-PNEGKTADGLVFFLAPVGSTQPLKGGGLLGLFKDESYNKSNQIVAVEFDTFRNVAW-DPNGIHMGIDV-----NSIQSVRTVRWDWANGEVANVFISYEASTKSLTASLVYPSLEKSFILSAIVDLKKVLPEWVRVGFTATTGLSEDYVQTNDVLSWSF 263          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LECR_CLALU (Lectin-related protein (Fragment) OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 74/245 (30.20%), Postives = 107/245 (43.67%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX-------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFT 695
            +SF+F+ F   S  D  L+   A+  S G L LT     E+   +P   VGR LYS PV  W       A   T+FT  +   PN   +ADG+ F  A    P T+                       AVE DT+ N +  DP A H+GID+     N  +S  ++    ++G    V I Y    + L   + Y  +    ++   + L   +P  V VGF+A+TG    + E+H VL W+FT
Sbjct:   40 LSFTFTKF--VSNQDELLLQGDALVSSKGELQLTR---VENGQPIP-HSVGRALYSDPVHIWDSSTGSVASFVTSFTFVVEA-PNENKTADGIAFFLAP---PDTQVQSLGGFLGLFNSSVYNSSNQILAVEFDTFSNSW--DPTARHIGIDV-----NSIESTRTATWGWRNGEVAIVLITYVAPAETLIASLTYPSSQTSYILSAAVDLKSILPEWVRVGFSAATGRSAGYVETHDVLSWSFT 267          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_LENCU (Lectin OS=Lens culinaris PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 73/245 (29.80%), Postives = 108/245 (44.08%), Query Frame = 3
Query:    9 SFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            SFS + F+P      +LI  G    + G L+LT               VGR LYS P+  W       A   T+FT  I   P++ + AD  TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+++   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   35 SFSITKFSP---DQKNLIFQGDGYTTKGKLTLTKAVK---------STVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA-PSSYNVADEFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_BOWMI (Lectin OS=Bowringia mildbraedii PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13
Identity = 75/245 (30.61%), Postives = 109/245 (44.49%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP-----AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFTRS 701
            V F+F+ F         LI  G A   S   L LT   S  +P       VGR LY+ P+  W      A   TTFT  IS   +T  +A  +TF  A+ DT  P+                       AVE DTY N    DP+  H+GID+     N  +S  +S  D ++G+    HI Y+  +K L V  +Y  N    ++   + L+   P  V VGF+A+TG  +++++ +L W+F  S
Sbjct:    4 VCFTFTDFES---GQQDLIFQGDASVGSNKALQLTKVDSKGNPQG---GSVGRALYTAPIRLWQSSSLVASFETTFTFSISQGSSTPAAA--LTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVAVEFDTYPNTDIGDPNYRHIGIDV-----NSIRSKAASKWDWQNGKTATAHISYNSASKRLSVVSSYP-NSSPVVVSFDVELNNVGPPDVRVGFSATTG-QYTQTNNILAWSFRSS 233          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC1_PSOTE (Basic agglutinin OS=Psophocarpus tetragonolobus GN=WBAI PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13
Identity = 70/228 (30.70%), Postives = 99/228 (43.42%), Query Frame = 3
Query:   96 LSLTSDPSPESPDQLPLKKV----------GRVLYSQPVTAWP------AMISTTFTIRI-SPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAK--SLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGP------DFSESHQVLDWTFTRS 701
            L L  D    S   L L KV          GR LY++PV  W       A   T F+  I  P+P     ADG+ F  A   +   E                 AVE DT++N +  DP   H+GID+ ++ S      +LD+ GI         V I YD  TKIL+V + +        I   + L + +P SV VGF+A+TG       + +E+H +L W+F+ S
Sbjct:   18 LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFPRP-HPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVPFTLDNGGI-------ANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFSAS 235          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LCS2_ROBPS (Seed agglutinin 2 OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 68/242 (28.10%), Postives = 105/242 (43.39%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKK-VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTF 692
            +SFSF  F P       +    A+  S G L LT+       + +P +K +GR LY+ P   W       A   T+F+  I   PN   +ADG+ F  A   + P +                    AVE DT+ N +W DP   HMGI++     N   S+ +   +  +G    V I Y+  TK L   + Y       +I   + + + +P  V  GF+A+TG D  + +++ VL W+F
Sbjct:   35 LSFSFPKFAPNQ--PYLIFQRDALVTSTGVLQLTN-----VVNGVPSRKSLGRALYAAPFQIWDSTTGNVASFVTSFSFIIQA-PNPATTADGLAFFLAPVDTQPLDLGGMLGIFKNGYFNKSNQIVAVEFDTFSNRHW-DPTGRHMGINV-----NSIVSVKTVPWNWANGEVANVFISYEASTKSLTASLVYPSLETSFIIHAIVDVKDVLPEWVRFGFSATTGIDTGYVQTNDVLSWSF 262          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC4_GRISI (Lectin-4 OS=Griffonia simplicifolia PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 66/241 (27.39%), Postives = 103/241 (42.74%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLIC-MGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP-----AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 692
            V+F++  F   S  +G+ I  +G  T   G L LT   +  +P +      G+  YS+PV  W      A   T+FT  +  Y   T  ADG+ F  A   S   +                      AVE DT+ N  W+DP   H+GID+ ++ S      ++   D         HI YD  +KIL V ++Y  +    ++   + L++ +P  V +GF+A  G  + E   +L W F
Sbjct:    4 VNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVR---SSAGQASYSEPVFLWDSTGKAASFYTSFTFLLKNYGAPT--ADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWEND--DAYGSSIATAHITYDARSKILTVLLSYE-HGRDYILSHVVDLAKVLPQKVRIGFSAGVG--YDEVTYILSWHF 234          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LEC_BAUPU (Lectin OS=Bauhinia purpurea PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 68/243 (27.98%), Postives = 104/243 (42.80%), Query Frame = 3
Query:   12 FSFSSFNPKSCSDGS-LICMGAVTPSYGYLSLTSDPSPESPDQLPLKK-VGRVLYSQPVTAWPAM-------ISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFT 695
            F+F +F   +  +G+ +I +G  T + G L LT        D +PLK   G+  YS+PV  W +         S +F +R    P+ T  ADG  F  A   S   +                      AVE DT+ N  WSD    H+GI++ +  S      D+    +        HI YD  +KI+ V + Y  N     +   + L + +P  V +GF+  TG  F+E+  +L W+FT
Sbjct:   36 FTFPNFWSNTQENGTEIIFLGNATYTPGALRLTRI----GEDGIPLKSNAGQASYSRPVFLWDSTGHVASFYTSFSFIVRSIDVPHIT--ADGFAFFLAPVDSSVKDYGGCLGLFRYKTATDPSKNQVVAVEFDTWPNTEWSDLRYPHIGINVNSTVSVATTRWDNDDAYVTKS---TAHITYDATSKIITVLLTY-DNGRHYQLSHVVDLPKILPERVRIGFSGGTG--FNETQYILSWSFT 266          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LECS_SOPJA (Seed lectin OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 70/248 (28.23%), Postives = 106/248 (42.74%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPL-KKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX---------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFT 695
            +SFSF  F   S  +  L+   A+  S G L LT+       + +P+    GR LY  PV  W       A  +T+F+  +   P  + SADG+ F  A    PP                           AV+ DT+ N +  DP+  H+GID+ ++ S    +        ++G    V I Y   T+ L V + Y  +    ++   + L   +P  V VGFTA+TG    + E+H VL W+FT
Sbjct:   41 LSFSFPKF--ASNQEDLLLQGDALVSSKGELQLTT-----VENGVPIWNSTGRALYYAPVHIWDKSTGRVASFATSFSFVVKA-PVASKSADGIAFFLA----PPNNQIQGPGGGHLGLFHSSGYNSSYQIIAVDFDTHINAW--DPNTRHIGIDVNSINSTKTVTWG-----WQNGEVANVLISYQAATETLTVSLTYPSSQTSYILSAAVDLKSILPEWVRVGFTAATGLTTQYVETHDVLSWSFT 269          
BLAST of CX294964 vs. ExPASy Swiss-Prot
Match: LECG_ARAHY (Galactose-binding lectin OS=Arachis hypogaea PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 71/241 (29.46%), Postives = 104/241 (43.15%), Query Frame = 3
Query:    6 VSFSFSSFNPKSCSDGSLICMGAVTP-SYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFT 695
            VSF+F+SF+     + ++   G VT  S G + LT+     S        VGRVLY+ PV  W       A   T+F+  +    +  D ADG+ F  A  DT  P                      VE DTY N  ++DP  +H+GID+     N   S+ +   +  SG  ++V + YD  TK L V V      +   I + + L   +P  V  GF+AS      + H +  W+FT
Sbjct:   27 VSFNFNSFSE---GNPAINFQGDVTVLSNGNIQLTNLNKVNS--------VGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDY-DPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDV-----NSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDI-TTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFT 249          
The following BLAST results are available for this feature:
BLAST of CX294964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
LCB2_ROBPS2.210e-1430.04Bark agglutinin I polypeptide B OS=Robinia pseudoa... [more]
LECR_CLALU3.770e-1430.20Lectin-related protein (Fragment) OS=Cladrastis lu... [more]
LEC_LENCU6.431e-1429.80Lectin OS=Lens culinaris PE=1 SV=2[more]
LEC_BOWMI1.097e-1330.61Lectin OS=Bowringia mildbraedii PE=1 SV=1[more]
LEC1_PSOTE1.097e-1330.70Basic agglutinin OS=Psophocarpus tetragonolobus GN... [more]
LCS2_ROBPS4.168e-1328.10Seed agglutinin 2 OS=Robinia pseudoacacia PE=1 SV=... [more]
LEC4_GRISI9.286e-1327.39Lectin-4 OS=Griffonia simplicifolia PE=1 SV=3[more]
LEC_BAUPU2.069e-1227.98Lectin OS=Bauhinia purpurea PE=1 SV=2[more]
LECS_SOPJA2.069e-1228.23Seed lectin OS=Sophora japonica PE=2 SV=1[more]
LECG_ARAHY2.069e-1229.46Galactose-binding lectin OS=Arachis hypogaea PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC05065B03SK DroRLeaf1 Citrus clementina cDNA clone C05065B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294964 ID=CX294964; Name=CX294964; organism=Citrus clementina; type=EST; length=717bp
GAGGTGTTAGCTTCTCATTTTCCTCATTCAACCCAAAAAGTTGTAGCGAT
GGCAGCCTAATTTGCATGGGCGCAGTGACTCCAAGTTATGGCTACTTGAG
CCTCACATCAGACCCTTCACCAGAATCGCCAGATCAGCTGCCGCTAAAAA
AGGTTGGACGGGTTTTATACAGCCAGCCTGTGACTGCATGGCCAGCTATG
ATTAGTACCACCTTCACCATTAGGATCTCACCCTACCCAAATACAACGGA
TTCTGCAGATGGCATGACGTTTGTTTTTGCAACCGATACCAGCCCTCCAA
CTGAAAACTCCGCCGGCGGAAATCTTGGACTGAGTAACGGTGTTTCGCAA
TTAGCCGTGGAGCTGGACACTTACAAGAACGACTACTGGTCTGATCCAGA
TGCTAACCATATGGGCATTGACATAGCAAACTTAACATCGAATCCAGCCA
AGAGTCTCGACAGCTCTGGTATTGATCTCAAAAGTGGAAGACCGATCCAG
GTTCACATTTATTACGATGGATGGACGAAAATACTCTATGTTTATGTGGC
ATATGCGGGGAACCCACTTCAGAAGCTTATTGAAAGACCTATCCTCTTGT
CAGAAACAATTCCAAGCTCAGTCTATGTTGGCTTCACAGCATCCACAGGG
CCCGACTTTTCAGAAAGCCATCAGGTGCTTGATTGGACCTTCACACGTTC
CCATTGCCTTCTTCTCT
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