CX295016

Overview
NameCX295016
Unique NameCX295016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TYTR_LEIDO (Trypanothione reductase OS=Leishmania donovani GN=TPR PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34
Identity = 89/240 (37.08%), Postives = 133/240 (55.42%), Query Frame = 1
Query:    7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQLDGTKL----SYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRG---MGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRI-TDHGEEIVADVVLFATG 696
            A GGTCV  GCVPKK++V GA +   + ++  +GWE+  E +  +WK L+  K   +  +N  YK + ++  G+  + G G +   + V V + +        +   ++ILIATGS   R  +PG E  ITS+EA  LE+ PKR + +GGGYIAVEFA I+ G    G  VDL +R +L LRGFD E+R  + + L   GI +       ++ K+E+G   +  + G E   D V+ A G
Sbjct:   47 ALGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIG 286          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_CANGA (Glutathione reductase OS=Candida glabrata GN=GLR1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33
Identity = 84/214 (39.25%), Postives = 115/214 (53.74%), Query Frame = 1
Query:    7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH-----EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE 630
            A GGTCV  GCVPKK++ Y +     L  A  YG   +     E I F+W +  +K+   I RLNGIY+  L   GV++  G  K      VEVT+ D T   YSA  IL+ATG +      +PG EL   SD    LEE PK+ VV+G GYI +E A ++ G+GS   L+ R +  LR FD+ ++  V       GIN+H  T + ++ K E+
Sbjct:   49 ALGGTCVNVGCVPKKVMWYASDLATRLTHAHEYGLAQNVPLSKESITFNWPEFKKKRDAYIHRLNGIYENNLKKEGVEVVFGWAKFNKDGNVEVTKHDNTTEVYSADRILVATGGKPVYPEKVPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSDSHLVIRGKTVLRKFDEIIQNTVTDYYVEEGINVHKETNVDKVEKDEK 262          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_YARLI (Glutathione reductase OS=Yarrowia lipolytica GN=GLR1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.583e-33
Identity = 91/247 (36.84%), Postives = 130/247 (52.63%), Query Frame = 1
Query:    7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGW-EVHEKI--DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK-------LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT---DHGE-EIVADVVLFATGRAP 705
            A GGTCV  GCVPKK++   +   G +  A+ YG+ +V  K   +FDW     K+   + RLNGIY+R L   GV+       LY+ EG+      V V   DG    YSAK I+IATG + +   +PG E  I SD   +LE  PKR  V+GGGYI VE A ++ G+ S   L  R +  LR FD  ++  +       GIN+   + +K+++K + G   +T   D  E +I  D +++  GR P
Sbjct:   39 ALGGTCVNVGCVPKKVMWNASDLAGRIRQAKEYGFPDVDPKYADNFDWSGFKAKRDAYVKRLNGIYERNLQKEGVEYVFGWATLYKQEGQEFPL--VHVKSDDGNTKLYSAKKIMIATGGKPRLPDVPGAEYGIDSDGFFALETQPKRVAVVGGGYIGVELAGVFHGLNSETTLFCRGQTVLRAFDIMIQDTITDYYVKEGINVLKGSGVKKIVKKDNGELLVTYEQDGAEKDITLDSLIWTIGREP 283          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCR (Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 84/244 (34.43%), Postives = 136/244 (55.74%), Query Frame = 1
Query:    4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEK-IDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT-DHGEEIVADVVLFATGRAP 705
            SA GGTCV  GCVPKK++V GA +   L ++  +GWE     +  +WKKL+  K + +L +N  Y+ +  +  G++ + G G +   N V V +        K     ++IL+A+GS      IPG E  I+S+EA  L E P+R + +GGG+I+VEFA I   ++     V L +R E+ LRGFD  +R  + + L   GI +  +    ++  + +G K +T + G+++  D+V+ A GR+P
Sbjct:   47 SALGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSP 290          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_STRTR (Glutathione reductase OS=Streptococcus thermophilus GN=gor PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.361e-32
Identity = 89/232 (38.36%), Postives = 124/232 (53.45%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELED-ARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT-DHGEEIVADVVLFATGRA 702
            GGTCV  GCVPKK++ YGA     L   A  YG++V    +FD+  L   +   I R++G ++R   + GV+      + V P+ VEV         Y+A HILIATG       IPG E  ITSD    L+E+PKR  V+G GYIAVE A +   +GS   L  RK+ PLR FD ++  V+   +   G  LH      E++K+ +    I+ D+ E I  D +++A GRA
Sbjct:   39 GGTCVNVGCVPKKVMWYGAQVAETLHRYAGEYGFDVTIN-NFDFATLKANRQAYIDRIHGSFERGFDSNGVERVYEYARFVDPHTVEVAGE-----LYTAPHILIATGGHPLYPNIPGSEYGITSDGFFELDEVPKRTAVIGAGYIAVEVAGVLNALGSDTHLFVRKDRPLRTFDKDIIDVLVDEMAKSGPTLHMHANATEVVKNADDSLTISFDNEETITVDCLIWAVGRA 264          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TRXR1_RAT (Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus GN=Txnrd1 PE=1 SV=4)

HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32
Identity = 84/239 (35.15%), Postives = 129/239 (53.97%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPR---TTIKELIKSEEGVKRIT---DHGEEIVAD---VVLFATGR 699
            GGTCV  GC+PKK++   A  G  L+D+R+YGW++ + +  DW+K+ +   + I  LN  Y+  L    V      GK +GP+++  T   G +  YSA+  LIATG R +   IPG +E  I+SD+  SL   P + +V+G  Y+A+E A    G+G  V ++ R  L LRGFD +M   +  ++E  GI    +   T I+++     G  ++T    + EE + D    VL A GR
Sbjct:   56 GGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGR 293          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_YEAST (Glutathione reductase OS=Saccharomyces cerevisiae GN=GLR1 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32
Identity = 82/214 (38.32%), Postives = 116/214 (54.21%), Query Frame = 1
Query:    7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH-----EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE 630
            A GGTCV  GCVPKK++ Y +     +  A  YG   +     E + F+W +  QK+   + RLNGIY++ L    V +  G  +      VEV + D T   YSA HIL+ATG +A     IPG EL   SD    LEE PK+ VV+G GYI +E A ++ G+GS   L+ R E  LR FD+ ++  +  +    GIN+H  + I ++ K+ E
Sbjct:   56 ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVE 269          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32
Identity = 84/239 (35.15%), Postives = 127/239 (53.14%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPR---TTIKELIKSEEGVKRIT---DHGEEIVA---DVVLFATGR 699
            GGTCV  GC+PKK++   A  G  L+D+R+YGW+V + +  DW+K+ +     I  LN  Y+  L    V      G+ +GP+ +  T   G +  YSA+  LIATG R +   IPG +E  I+SD+  SL   P + +V+G  Y+A+E A    G+G  V ++ R  L LRGFD +M   +  ++E  GI    +   T I+++     G  R+T    + EE +    + VL A GR
Sbjct:  170 GGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGR 407          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TRXR1_PONAB (Thioredoxin reductase 1, cytoplasmic OS=Pongo abelii GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31
Identity = 82/239 (34.31%), Postives = 128/239 (53.56%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG------VKRITDHGEEIVA---DVVLFATGR 699
            GGTCV  GC+PKK++   A  G  L+D+R+YGW+V E +  DW ++++   + I  LN  Y+  L    V      G+ +GP+ ++ T   G +  YSA+  LIATG R +   IPG +E  I+SD+  SL   P + +++G  Y+A+E A    G+G  V ++ R  L LRGFD +M   +  ++E  GI    +    ++ + E G      V   + + EEI+    + VL A GR
Sbjct:   56 GGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLIVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVLLAIGR 293          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TRXR1_HUMAN (Thioredoxin reductase 1, cytoplasmic OS=Homo sapiens GN=TXNRD1 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31
Identity = 82/239 (34.31%), Postives = 128/239 (53.56%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG------VKRITDHGEEIVA---DVVLFATGR 699
            GGTCV  GC+PKK++   A  G  L+D+R+YGW+V E +  DW ++++   + I  LN  Y+  L    V      G+ +GP+ ++ T   G +  YSA+  LIATG R +   IPG +E  I+SD+  SL   P + +V+G  Y+A+E A    G+G  V ++ R  L LRGFD +M   +  ++E  GI    +    ++ + E G      V   + + EEI+    + V+ A GR
Sbjct:  206 GGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 443          
The following BLAST results are available for this feature:
BLAST of CX295016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
TYTR_LEIDO4.232e-3437.08Trypanothione reductase OS=Leishmania donovani GN=... [more]
GSHR_CANGA2.100e-3339.25Glutathione reductase OS=Candida glabrata GN=GLR1 ... [more]
GSHR_YARLI3.583e-3336.84Glutathione reductase OS=Yarrowia lipolytica GN=GL... [more]
TYTR_TRYCR1.042e-3234.43Trypanothione reductase OS=Trypanosoma cruzi GN=TP... [more]
GSHR_STRTR1.361e-3238.36Glutathione reductase OS=Streptococcus thermophilu... [more]
TRXR1_RAT3.033e-3235.15Thioredoxin reductase 1, cytoplasmic OS=Rattus nor... [more]
GSHR_YEAST3.033e-3238.32Glutathione reductase OS=Saccharomyces cerevisiae ... [more]
TRXR1_MOUSE8.825e-3235.15Thioredoxin reductase 1, cytoplasmic OS=Mus muscul... [more]
TRXR1_PONAB2.568e-3134.31Thioredoxin reductase 1, cytoplasmic OS=Pongo abel... [more]
TRXR1_HUMAN3.353e-3134.31Thioredoxin reductase 1, cytoplasmic OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionC05065F09SK DroRLeaf1 Citrus clementina cDNA clone C05065F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295016 ID=CX295016; Name=CX295016; organism=Citrus clementina; type=EST; length=706bp
GATTCGGCCGAGGGTGGAACCTGTGTCATTCGTGGTTGTGTACCCAAAAA
GATATTGGTCTATGGAGCATCATTTGGAGGTGAACTTGAGGATGCAAGGA
GTTATGGATGGGAGGTACACGAGAAAATTGACTTCGACTGGAAAAAACTT
CTGCAAAAGAAGACAGATGAGATACTCAGATTAAATGGAATTTACAAGCG
ATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGAGGGAAAGATAG
TTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCACTAAGTTAAGT
TACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGGGCTCAACGTGC
TCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGAGGCATTGAGCT
TGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAGGGTACATTGCT
GTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACTGTGGATCTATT
ATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGAAATGCGGGCAG
TAGTTGCCAGAAATCTGGAAGGGAGGGGAATTAATTTGCACCCGAGGACT
ACCATAAAGGAGTTGATTAAGTCAGAGGAGGGTGTAAAACGTATTACAGA
TCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCCACTGGCAGGG
CACCTA
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