CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.343e-54
Identity = 107/244 (43.85%), Postives = 152/244 (62.30%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            GLPPGVLN+++G G  AGA LASH  VDK+ FTG   TG  +   AAK  +KPV+LELGGKSP I+FDD D+D+AVE   F  F+  GQ C A SR  VHER+ DEF++K         + DPF+ G   GP +   Q+E+VL+++ +     AT+ CGG R  +  +GYFV+P + S+V   M I ++E+FGP   +  F   D+ I+ AN +++GLA  V +   +  + + +A +AG VW+
Sbjct:  205 GLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKL-VKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLVHERIADEFLDKLVKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKGYFVEPAIVSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWV 447          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.290e-54
Identity = 103/245 (42.04%), Postives = 157/245 (64.08%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V + ++D+FV+K      +  +G+P       GPQ       K++ Y + G++  ATL CGG+++   G+F QPTVF+DV+D M IA++E FGP+  I +F   + D V+ RAN T FGLA+GVFT+  + A  +   L+AGTV++
Sbjct:  616 AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQKVVEEVGKMKIGNPLDRDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFV 860          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_AGRT5 (Betaine aldehyde dehydrogenase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=betB PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.290e-54
Identity = 117/246 (47.56%), Postives = 149/246 (60.57%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA  +LK VT+ELGGKSP I+FDDAD++ AV  A    FY+ GQ C  G+R +V ++    F+E  K R    I+GDP       GP +   Q EKVL YI  G    ATL  GG   + +   G +VQPTVF+DV DDM IA++EIFGPV  +L F + D+V+ RAN T FGLA GVFT     A+ ++  L AGT+WI
Sbjct:  201 AGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWI 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.991e-54
Identity = 105/245 (42.86%), Postives = 157/245 (64.08%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV+NV+ G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V + ++DEFV +      +  VG+P     + GPQ       K++ Y + G++  ATL CGG+++   G+F +PTVF+DV+D M IA++E FGPV  I +F   + D V+ RAN T FGLA+GVFT+  + A  +   L+AGTV++
Sbjct:  616 AGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFV 860          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 102/245 (41.63%), Postives = 155/245 (63.27%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV+N++ G G   G  L+ H DV K+ FTG    GK + +  A SN+K V+LELGGKSP IIF D D+D+AV +   ++F+N+G+ C A  R ++ E ++DEFV++      +  +GDP     + GPQ      +K++ Y ++G++    L  GG ++   G+F +PT+F+DV D+M IA++E FGPV  I KF   + D V++RAN + FGLA+GVFTK  + A  +   L+AGTV++
Sbjct:  616 AGIPKGVINILPGAGSLIGQRLSDHPDVRKIGFTGSTPIGKQIMKSCAVSNVKKVSLELGGKSPLIIFHDCDLDKAVRMGMSSVFFNKGENCIAAGRLFLEESIHDEFVKRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGGKLVYGGKQVERPGFFFEPTIFTDVTDEMFIAKEESFGPVMIISKFNDGDIDGVLKRANDSEFGLASGVFTKDINKALYVSEKLQAGTVFV 860          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 115/247 (46.56%), Postives = 148/247 (59.92%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP II DDAD+D+A ++A  A FY+ GQ C  G+R +V   +   F  K   R  R   G+P       GP +  +  E VL YI  G E  A + CGG+RL      +G FV PTVF+D  DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T     A+ ++  L AG  WI
Sbjct:  195 AGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICDDADLDKAADIAMMANFYSSGQVCTNGTRVFVPAAMKAAFEAKIAERVARIRAGNPEDENTNFGPLVSFQHMESVLSYIAKGKEEGARVLCGGERLTAGDFAKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILSYETEEEVIRRANDTEYGLAAGVCTNDISRAHRIIHKLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 113/247 (45.75%), Postives = 147/247 (59.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K   R  R  +GDP       GP +     E VL YI SG    A L CGG+R+ +     G +V PTVF+D  DDM I ++EIFGPV SIL + + D+ IRRAN T +GLAAGV T+    A+  +  L AG  WI
Sbjct:  195 AGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGNGAYVAPTVFTDCSDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 115/248 (46.37%), Postives = 148/248 (59.68%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRL-----GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K   R  R  +GDP       GP +     E VL YI SG    A L CGG+R+     GN G +V PTVF+D  DDM I ++EIFGPV SIL + + D+ IRRAN T +GLAAGV T+    A+  +  L AG  WI
Sbjct:  195 AGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTEGAFGN-GAYVAPTVFTDCSDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECO27 (Betaine aldehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 115/247 (46.56%), Postives = 149/247 (60.32%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  GIE  A + CGGD L     + G +V PTVF+D  DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPTKCKAAFEQKVLARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGIEEGARVLCGGDVLKGDSFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 210.69 bits (535), Expect = 6.664e-54
Identity = 106/243 (43.62%), Postives = 157/243 (64.61%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G+P GV+N+V G G T GAAL +   + KL+FTG  + GK V   +++SNLK +TLELGGKS  ++FDDA++ + +      +F N GQ C +GSR YV E +YDE +   KA     I VG+PF     QG   + +QF+ ++ YI  G +  A +  GG+++G++GYF++PTVF DV +DM I ++EIFGPV ++ KFK  ++ +  AN + FGL +G+ T+S  T   + + L+AGTVWI
Sbjct:  216 GIPAGVVNIVPGPGRTVGAALTNDPRIRKLAFTGSTEVGKSVAVDSSESNLKKITLELGGKSAHLVFDDANIKKTLPNLVNGIFKNAGQICSSGSRIYVQEGIYDELLAAFKAYLETEIKVGNPFDKANFQGAITNRQQFDTIMNYIDIGKKEGAKILTGGEKVGDKGYFIRPTVFYDVNEDMRIVKEEIFGPVVTVAKFKTLEEGVEMANSSEFGLGSGIETESLSTGLKVAKMLKAGTVWI 458          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BADH2_ARATH1.343e-5443.85Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
FTHFD_MOUSE2.290e-5442.0410-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
BETB_AGRT52.290e-5447.56Betaine aldehyde dehydrogenase OS=Agrobacterium tu... [more]
FTHFD_HUMAN2.991e-5442.8610-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
FTHFD_XENLA3.907e-5441.6310-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
BETB_PSEE43.907e-5446.56Betaine aldehyde dehydrogenase OS=Pseudomonas ento... [more]
BETB_PSEAB3.907e-5445.75Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA73.907e-5446.37Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_ECO273.907e-5446.56Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
ALDH6_YEAST6.664e-5443.62Magnesium-activated aldehyde dehydrogenase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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