CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.642e-53
Identity = 112/247 (45.34%), Postives = 149/247 (60.32%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L   G+    +V PTVF+D +D+M I ++EIFGPV S+L ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.642e-53
Identity = 112/247 (45.34%), Postives = 149/247 (60.32%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L   G+    +V PTVF+D +D+M I ++EIFGPV S+L ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.642e-53
Identity = 106/244 (43.44%), Postives = 149/244 (61.07%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            GLPPGVLNV++G+G  AGA LASH  VDK++FTG   TG  V   AA+  +KPV++ELGGKSP I+FDD D+D+A E A F  F+  GQ C A SR  VHE +  EF+EK    +    + DP + G   GP +   Q+EK+L++I +     AT+  GG R  +  +G+F++PT+ +DV   M I ++E+FGPV  +  F   D+ I  AN + +GL A V +   +  + +  A  AG VWI
Sbjct:  205 GLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQL-VKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRISEAFEAGIVWI 447          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL9A1_PONAB (4-trimethylaminobutyraldehyde dehydrogenase OS=Pongo abelii GN=ALDH9A1 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 5.642e-53
Identity = 112/250 (44.80%), Postives = 154/250 (61.60%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD-------RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+PPG+ NVV G G   G  L  H DV K+SFTG   TG  + E++AK  +KPVTLELGGKSP IIF D D++ AV+ A  A F  QGQ CC G+R +V + + D+F E+   +  R  +GDP       GP I+    E+VL +++   E  A + CGGD       +L + GY+++P V ++ +DDM   ++EIFGPV SIL F    +V+ RAN T FGLAAGVFT+    A+ ++  L+AGT +I
Sbjct:  199 AGVPPGLFNVVQG-GAATGQFLCQHPDVAKVSFTGSVPTGMKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMNNAVKGALMANFLTQGQVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKD-GYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFI 445          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL9A1_HUMAN (4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens GN=ALDH9A1 PE=1 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 5.642e-53
Identity = 112/250 (44.80%), Postives = 154/250 (61.60%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD-------RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+PPG+ NVV G G   G  L  H DV K+SFTG   TG  + E++AK  +KPVTLELGGKSP IIF D D++ AV+ A  A F  QGQ CC G+R +V + + D+F E+   +  R  +GDP       GP I+    E+VL +++   E  A + CGGD       +L + GY+++P V ++ +DDM   ++EIFGPV SIL F    +V+ RAN T FGLAAGVFT+    A+ ++  L+AGT +I
Sbjct:  199 AGVPPGLFNVVQG-GAATGQFLCQHPDVAKVSFTGSVPTGMKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMNNAVKGALMANFLTQGQVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKD-GYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFI 445          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF D D+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP    V  GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADVDLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_ECOSE5.642e-5345.34Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLU5.642e-5345.34Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BADH1_ARATH5.642e-5343.44Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
AL9A1_PONAB5.642e-5344.804-trimethylaminobutyraldehyde dehydrogenase OS=Pon... [more]
AL9A1_HUMAN5.642e-5344.804-trimethylaminobutyraldehyde dehydrogenase OS=Hom... [more]
BETB_YERPY9.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPP9.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPN9.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPE9.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPB9.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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