CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEDALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECOL6 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6 GN=betB PE=3 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 148/247 (59.92%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGG+ L     + G +V PTVF+D  DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPTKCKAAFEQKVLARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGNVLKGDSFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 148/247 (59.92%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L     + G +V PTVF+D  D+M I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCNAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGLDNGAWVAPTVFTDCSDEMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 113/247 (45.75%), Postives = 148/247 (59.92%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L     + G +V PTVF+D  D+M I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCNAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGLDNGAWVAPTVFTDCSDEMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.257e-52
Identity = 107/247 (43.32%), Postives = 147/247 (59.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G + G AL  H  ++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L CGG+RL +    +GY+V PT+FSD  D M I ++EIFGPV S+L + + D+ + RAN T +GLAAGV T     A+ ++  L AG  W+
Sbjct:  195 AGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLVSAAHMQRVLEHIEQGKAEGARLLCGGERLQDGALAQGYYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRANATTYGLAAGVVTPDLARAHRLIHRLEAGICWV 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.257e-52
Identity = 110/243 (45.27%), Postives = 150/243 (61.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLPPG+ NVV G G   GAAL +   V K+S TG   TG+ V   AA+  ++ VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +V + + + F+ +   RA    +GDP    V+ GP +   Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A++E+FGPV ++L F+  ++ I RAN T FGLAAGVFT     A+ ++  L+AGT WI
Sbjct:  194 AGLPPGLFNVVQGRG-AVGAALVTDSRVAKVSLTGSVPTGRRVYAAAAEG-VRHVTMELGGKSPLIVFDDADLESAIGAAMLGNFYSAGQICSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWI 434          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.800e-52
Identity = 108/247 (43.72%), Postives = 147/247 (59.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G + G AL  H +++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L CGG+RL +    +G +V PT+FSD  D M I ++EIFGPV S+L + + D+ I RAN T +GLAAGV T     A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.800e-52
Identity = 108/247 (43.72%), Postives = 147/247 (59.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G + G AL  H +++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L CGG+RL +    +G +V PT+FSD  D M I ++EIFGPV S+L + + D+ I RAN T +GLAAGV T     A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_RHOS4 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=betB PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.800e-52
Identity = 109/243 (44.86%), Postives = 150/243 (61.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLPPG+ NVV G G   GA+L +   V K+S TG   TG+ V   AA+  ++ VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +V + + + F+ +   RA    +GDP    V+ GP +   Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A++E+FGPV ++L F+  ++ I RAN T FGLAAGVFT     A+ ++  L+AGT WI
Sbjct:  194 AGLPPGLFNVVQGRG-AVGASLVTDSRVAKVSLTGSVPTGRRVYAAAAEG-VRHVTMELGGKSPLIVFDDADLESAIGAAMLGNFYSAGQICSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWI 434          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_YERPA9.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERP39.623e-5345.75Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_ECOL69.623e-5345.75Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E9.623e-5345.75Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO579.623e-5345.75Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_XANC51.257e-5243.32Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_RHOS11.257e-5245.27Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_XANCB2.800e-5243.72Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC82.800e-5243.72Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_RHOS42.800e-5244.86Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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