CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52
Identity = 113/247 (45.75%), Postives = 149/247 (60.32%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V   +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WI
Sbjct:  195 AGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPLALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52
Identity = 107/247 (43.32%), Postives = 146/247 (59.11%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G + G AL  H  ++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP       ++VL +I  G    A L CGG+RL +    +GY+V PT+FSD  D M I ++EIFGPV S+L + + D+ + RAN T +GLAAGV T     A+ ++  L AG  W+
Sbjct:  195 AGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDVAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLASAAHMQRVLEHIEQGKAEGARLLCGGERLQDGALVQGYYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRANATTYGLAAGVVTPDLARAHRLIHRLEAGICWV 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52
Identity = 114/247 (46.15%), Postives = 146/247 (59.11%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP II DDAD+D A ++A  A FY+ GQ C  G+R +V  +   EF  K   R  R   GD F      GP +     + VLRYI SG    A L CGG+ L   G+    +V PTVF+D  D+M I ++EIFGPV SIL + +  +VIRRAN T +GLAAGV T + + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGIGAETGQYLTEHPGIAKISFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIIADDADLDLAADIAMMANFYSSGQVCTNGTRVFVPAKQKAEFEHKILERVGRIRPGDLFADDTNFGPLVSFPHRDNVLRYIESGKREGARLLCGGEALKGDGFDNGAWVAPTVFTDCSDEMTIVREEIFGPVMSILSYTDEAEVIRRANATEYGLAAGVVTPNLNRAHRLIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_SINMW (Betaine aldehyde dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=betB PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52
Identity = 109/246 (44.31%), Postives = 150/246 (60.98%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV G   T G  L +H DV K+S TG   TG+ V E AA + L+ VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +V +++   F+ + K R    ++GDP     + GP +   Q +KV  YI  G    A L  GG   + +   G ++QPTVF+DV D+M IA++EIFGPV  +L F +  +V+ RAN T FGL+AGVFT     A+ ++  L AGT+WI
Sbjct:  195 AGLPKGLYNVVQGDRST-GPLLVNHPDVAKVSLTGSVPTGRKVYEAAA-AGLRHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVQKKIKQSFLARLKERTDAIVIGDPMDEATQLGPMVSTAQRDKVFSYIEKGKSEGARLVTGGGIPNNVSAEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDRLEAGTLWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECO8A (Betaine aldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betB PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52
Identity = 112/247 (45.34%), Postives = 148/247 (59.92%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L     + G +V PTVF+D  D+M I ++EIFGPV SIL ++  ++VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIVKGKEEGARVLCGGDVLKGDGLDNGAWVAPTVFTDCSDEMTIVREEIFGPVMSILTYESEEEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52
Identity = 112/247 (45.34%), Postives = 148/247 (59.92%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L     + G +V PTVF+D  D+M I ++EIFGPV SIL ++  ++VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIVKGKEEGARVLCGGDVLKGDGLDNGAWVAPTVFTDCSDEMTIVREEIFGPVMSILTYESEEEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52
Identity = 109/249 (43.78%), Postives = 149/249 (59.84%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG------NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+PPG+ NVV G G   G  L  H DV K+SFTG   TG  + E++AK  +KPVTLELGGKSP IIF D D+  AV+ A  A F  QG+ CC G+R +V + + D+F E+   +  R  +GDP       GP I+    E+VL +++   E  A + CGGD           GY+++P V ++ +DDM   ++EIFGPV SIL F    +V+ RAN T FGLAAGVFT+    A+ ++  L+AG  +I
Sbjct:  199 AGVPPGLFNVVQG-GAATGQFLCQHRDVAKVSFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMKNAVKGALMANFLTQGEVCCNGTRVFVQKEILDQFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDVFVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 445          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.237e-52
Identity = 110/243 (45.27%), Postives = 149/243 (61.32%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLPPG+ NVV G G   GAAL +   V K+S TG   TG+ V   AA+  ++ VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +V + + + F+ +   RA    +GDP    V+ GP +   Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A +E+FGPV ++L F+  ++ I RAN T FGLAAGVFT     A+ ++  L+AGT WI
Sbjct:  194 AGLPPGLFNVVQGRGGV-GAALVTDSRVAKVSLTGSVPTGRRVYAAAAEG-VRHVTMELGGKSPLIVFDDADLESAIGAAMLGNFYSAGQICSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLACEEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWI 434          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.237e-52
Identity = 112/247 (45.34%), Postives = 147/247 (59.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD++ A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R    D F      GP +     + VLRYI  G E  A + CGGD L   G+    +V PTVF+D  DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLELAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRADDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILIYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL9A1_RAT (4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.064e-51
Identity = 109/249 (43.78%), Postives = 147/249 (59.04%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG------NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P G+ NVV G G   G  L  H DV K+SFTG   TG  + E+AAK  +KP+TLELGGKSP IIF D ++  AV+ A  A F  QGQ CC G+R +V + + D F ++   +  R  +GDP       GP I+    E+VL ++RS  E  AT+ CGG+           GY++ P + ++  DDM   ++EIFGPV SIL F+   +V+ RAN T FGLAAGVFT+    A+ +   L+AGT +I
Sbjct:  199 AGAPNGLFNVVQG-GAATGQFLCQHRDVAKVSFTGSVPTGMKIMEMAAKG-IKPITLELGGKSPLIIFSDCNMKNAVKGALLANFLTQGQVCCNGTRVFVQKEIADAFTKEVVRQTQRIKIGDPLLEDTRMGPLINAPHLERVLGFVRSAKEQGATVLCGGEPYAPEDPKLKHGYYMTPCILTNCTDDMTCVKEEIFGPVMSILTFETEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYI 445          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_YERPS3.657e-5245.75Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_XANAC3.657e-5243.32Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]
BETB_KLEP33.657e-5246.15Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
BETB_SINMW4.776e-5244.31Betaine aldehyde dehydrogenase OS=Sinorhizobium me... [more]
BETB_ECO8A4.776e-5245.34Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO244.776e-5245.34Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
AL9A1_BOVIN4.776e-5243.784-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
BETB_RHOSK6.237e-5245.27Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_ECOL56.237e-5245.34Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
AL9A1_RAT1.064e-5143.784-trimethylaminobutyraldehyde dehydrogenase OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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