CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.815e-51
Identity = 109/247 (44.13%), Postives = 152/247 (61.54%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV N+V G G T G  LA + DVD +SFTG  +TGK +   AA  N+K + LELGGK+P I+F DAD++ AV+ A  A+F++ GQ C AGSR  V + ++D+F+ +   RA R  +G+ F +  E GP I  E   KV +Y+  GIE  A LE GG R  +     G+F +PT+FS+   DM I Q+E+FGPV ++  F   ++VI  AN T +GLA  V++K  +    +   LR GTVWI
Sbjct:  193 AGVPKGVANLVLGPGATVGDELAVNKDVDLISFTGGIETGKKIMR-AASGNVKKIALELGGKNPNIVFKDADLEVAVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKRIKLGNGFHAETESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPEDPELQNGFFYEPTIFSNCNSDMRIVQEEVFGPVLTVETFSSEEEVIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.815e-51
Identity = 114/248 (45.97%), Postives = 151/248 (60.89%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V + +  +F EKA    ++RI +GDP       GP       EKVL +I SG +  A +  GG R       +G +V PTVFSD  D M I Q+EIFGPV SIL ++  ++VI+RAN T FGLAAGV T+    A+ ++  + AG  WI
Sbjct:  195 AGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSLLVDF-EKAVVERVKRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.815e-51
Identity = 100/244 (40.98%), Postives = 153/244 (62.70%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            GLPPGVLN+++G G  AGA LASH  VDK++FTG  +TGK +  + A   +KPV+LELGGKSP I+FDD D+D+AVE A F  F N GQ C A SR  +HE++   F+++  A A    + DP + G   G  +   Q++K++++I +     AT+  GG R  +  RG+F++PT+ ++V   M I ++E+FGPV  + +F+   + +  AN T +GLA  V +   +    + +A+++G VWI
Sbjct:  207 GLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIM-ITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANAGQVCSATSRLLLHEKIAKRFLDRLVAWAKSIKISDPLEEGCRLGSVVSEGQYQKIMKFISTARCEGATILYGGARPQHLKRGFFIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTHYGLAGAVISNDLERCERISKAIQSGIVWI 449          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.370e-51
Identity = 111/247 (44.94%), Postives = 147/247 (59.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F +    R  R ++GDP       GP       EKVL +I SG +  A +  GG R       +G +V PTVFSD  D M I Q+EIFGPV SIL ++  ++VI+RAN T FGLAAGV T+    A+ ++  + AG  WI
Sbjct:  195 AGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRILIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILGYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB1_RHIME (Betaine aldehyde dehydrogenase 1 OS=Rhizobium meliloti GN=betB1 PE=3 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.370e-51
Identity = 110/246 (44.72%), Postives = 147/246 (59.76%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NV+ G   T G  L +H DV K+S TG   TGK V   AA + LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +V  ++ + F+ + K R    ++GDP     + GP +   Q +KV  YI  G    A L  GG   + +   G ++QPTVF+DV D M IA++EIFGPV  +L F +  +VI RAN T FGL+AGVFT     A+ +   L AGT+WI
Sbjct:  195 AGLPKGLFNVIQGDRAT-GPLLVNHPDVAKVSLTGSVPTGKKVAGAAA-AELKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVQRKIKEPFLARLKERTEAIVIGDPLDEATQLGPMVSAAQRDKVFSYIGKGKAEGARLVTGGGIPNNVSGEGTYIQPTVFADVTDGMTIAREEIFGPVMCVLDFDDEVEVIARANATEFGLSAGVFTADLTRAHRVADRLEAGTLWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51
Identity = 115/248 (46.37%), Postives = 150/248 (60.48%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F EKA    ++RI VGDP       GP       EKVL +I SG +  A +  GG R       +G +V PTVFSD  D M I Q+EIFGPV SIL ++  ++VI+RAN T FGLAAGV T+    A+ ++  + AG  WI
Sbjct:  195 AGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADF-EKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51
Identity = 115/248 (46.37%), Postives = 150/248 (60.48%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F EKA    ++RI VGDP       GP       EKVL +I SG +  A +  GG R       +G +V PTVFSD  D M I Q+EIFGPV SIL ++  ++VI+RAN T FGLAAGV T+    A+ ++  + AG  WI
Sbjct:  195 AGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADF-EKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51
Identity = 115/248 (46.37%), Postives = 150/248 (60.48%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F EKA    ++RI VGDP       GP       EKVL +I SG +  A +  GG R       +G +V PTVFSD  D M I Q+EIFGPV SIL ++  ++VI+RAN T FGLAAGV T+    A+ ++  + AG  WI
Sbjct:  195 AGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADF-EKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.043e-51
Identity = 114/248 (45.97%), Postives = 150/248 (60.48%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F EKA    ++RI +GDP       GP       EKVL +I SG +  A +  GG R       +G +V PTVFSD  D M I Q+EIFGPV SIL ++  ++VI+RAN T FGLAAGV T+    A+ ++  + AG  WI
Sbjct:  195 AGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADF-EKAVVERVKRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQIEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.280e-51
Identity = 107/247 (43.32%), Postives = 146/247 (59.11%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV+ G G + G AL  H +++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L  GG+RL +    +G +V PT+FSD  D M I ++EIFGPV S+L + + D+ I RAN T +GLAAGV T     A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLFGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWI 441          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BACSU1.815e-5144.13Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
BETB_ACIBT1.815e-5145.97Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BADH_ORYSJ1.815e-5140.98Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]
BETB_ACIBS2.370e-5144.94Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB1_RHIME2.370e-5144.72Betaine aldehyde dehydrogenase 1 OS=Rhizobium meli... [more]
BETB_ACIBY3.096e-5146.37Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB53.096e-5146.37Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB33.096e-5146.37Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC4.043e-5145.97Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_XANCP5.280e-5143.32Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
back to top