CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDA_STAES (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=aldA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.998e-46
Identity = 101/246 (41.06%), Postives = 142/246 (57.72%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESN-ATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            LP GV+NV++G G  +G A+  H  VDKLSFTG  D G  V +  A+  + P TLELGGKS  IIFDDA+++Q +E     + +NQG+ C AGSR  V   +YDE + K K       VGDPF    +   Q  PEQ +K+  YI+   E + A +  GG R+     ++GYF +PT+     +   +AQ+EIFGPV  + KF +  + I  AN + +GLA G+FT     A  + +A+R G +WI
Sbjct:  203 LPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAE-RIVPTTLELGGKSANIIFDDANLEQVIEGVQLGILFNQGEVCSAGSRLLVQSSIYDELLPKLKEAFENIKVGDPFDEDTKMSAQTGPEQLDKIESYIKIAEEDDKANILTGGHRITDNGLDKGYFFEPTIIEINDNKHQLAQEEIFGPVVVVEKFDDEQEAIEIANDSEYGLAGGIFTTDIHRALNVAKAMRTGRIWI 447          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDA_STAEQ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=aldA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.998e-46
Identity = 101/246 (41.06%), Postives = 142/246 (57.72%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESN-ATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            LP GV+NV++G G  +G A+  H  VDKLSFTG  D G  V +  A+  + P TLELGGKS  IIFDDA+++Q +E     + +NQG+ C AGSR  V   +YDE + K K       VGDPF    +   Q  PEQ +K+  YI+   E + A +  GG R+     ++GYF +PT+     +   +AQ+EIFGPV  + KF +  + I  AN + +GLA G+FT     A  + +A+R G +WI
Sbjct:  203 LPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAE-RIVPTTLELGGKSANIIFDDANLEQVIEGVQLGILFNQGEVCSAGSRLLVQSSIYDELLPKLKEAFENIKVGDPFDEDTKMSAQTGPEQLDKIESYIKIAEEDDKANILTGGHRITDNGLDKGYFFEPTIIEINDNKHQLAQEEIFGPVVVVEKFDDEQEAIEIANDSEYGLAGGIFTTDIHRALNVAKAMRTGRIWI 447          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALD1_STAHJ (Putative aldehyde dehydrogenase SH0913 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0913 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.680e-46
Identity = 102/245 (41.63%), Postives = 143/245 (58.37%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G+P GV N+V+G G   G  L+ H  V  +SFTG   TG  + E A+K + K V+LELGGKSP+I+ DD DV +A +     +  N GQ C AG+R  + E   ++F+   K    +  VGDP + G + GP I  +QF+ V  YI  GIE  A L  GG       N GYF +PT+F +V +DM IAQ+EIFGPV S++ +   D+ I+ AN T++GLA  V  K  +T   + R++ AG + I
Sbjct:  190 GVPKGVFNLVNGDGEGVGNPLSEHPKVRMMSFTGSGRTGSKIMEKASK-DFKKVSLELGGKSPYIVLDDVDVKEAAKATTGKVVNNTGQVCTAGTRILIPESKKEDFLTALKEEFSKVKVGDPREEGTQVGPIISKKQFDTVQSYIDKGIEEGAELFYGGPGKPEGLNTGYFARPTIFINVDNDMTIAQEEIFGPVASVITYNNLDEAIKIANDTKYGLAGYVIGKDKETLQKVARSIEAGRIEI 433          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: DHA2_RALEH (Acetaldehyde dehydrogenase 2 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoD PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.724e-46
Identity = 112/252 (44.44%), Postives = 152/252 (60.32%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRL---GN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            LPPGV+NV++G+G  AG  LAS   + K++FTG   TG+++ + A++ NL PVTLELGGKSP I F      DDA  D+A+E  A FAL  NQG+ C   SR  + E +YD F+E+A  R      G P  +G   G Q   EQ EK+L YI  G +  A    GG+R    G+   GY+V+PTVF+   + M I Q+EIFGPV S+  FK+ ++ +  AN T +GL AGV+T+    A  M R ++AG VW
Sbjct:  208 LPPGVVNVINGFGLEAGKPLASSPRISKVAFTGETTTGRLIMQYASQ-NLIPVTLELGGKSPNIFFEDVLAADDAFFDKALEGFAMFAL--NQGEVCTCPSRALIQESIYDRFMERALKRVAAIRQGHPLDTGTMIGAQASAEQLEKILSYIDLGRKEGAQCLTGGERNVLDGDLAGGYYVKPTVFAG-HNKMRIFQEEIFGPVVSVTTFKDEEEALAIANDTLYGLGAGVWTRDGARAFRMGRGIQAGRVW 455          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.139e-45
Identity = 102/243 (41.98%), Postives = 140/243 (57.61%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV+G     G  L S+  V KLSFTG  + G+ + E  AK ++K V+LELGG +PFI+FDDAD+D+AVE A  + F N GQ C   +R YV + VYD F EK +    +  +GD   +GV  GP ID +   KV  +I   +E  A + CGG      G F QPT+  DV  +  ++++E FGP+  + +FK+  DVI +AN T FGLAA  + +       +  AL  G V I
Sbjct:  199 AGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALD1_STAES (Putative aldehyde dehydrogenase SE_1720 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1720 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.139e-45
Identity = 100/245 (40.82%), Postives = 143/245 (58.37%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G+P GV N+V+G G   G  L+ H  V  +SFTG   TG  + E AAK + K V+LELGGKSP+I+ DD DV++A       +  N GQ C AG+R  + E + ++++   K    +  VG P + G + GP I  +QF++V  YI  GI   A L  GG       ++GYF +PT+F +V + M IAQ+EIFGPV S++ +   D+ I  AN T++GLA  V  K  DT   + R++ AGT+ I
Sbjct:  190 GVPKGVFNLVNGDGSGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDVEEAANATTKKVVNNTGQVCTAGTRVLIPESIKEDYLTAVKEAFSKVKVGQPREEGTQVGPIISKKQFDQVQDYIDKGINEGAELFYGGPGKPEGLDKGYFARPTIFINVDNHMTIAQEEIFGPVMSVITYNNLDEAIEIANDTKYGLAGYVIGKDKDTLRHVARSIEAGTIEI 433          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALD1_STAEQ (Putative aldehyde dehydrogenase SERP1729 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1729 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.139e-45
Identity = 100/245 (40.82%), Postives = 143/245 (58.37%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G+P GV N+V+G G   G  L+ H  V  +SFTG   TG  + E AAK + K V+LELGGKSP+I+ DD DV++A       +  N GQ C AG+R  + E + ++++   K    +  VG P + G + GP I  +QF++V  YI  GI   A L  GG       ++GYF +PT+F +V + M IAQ+EIFGPV S++ +   D+ I  AN T++GLA  V  K  DT   + R++ AGT+ I
Sbjct:  190 GVPKGVFNLVNGDGSGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDVEEAANATTKKVVNNTGQVCTAGTRVLIPESIKEDYLTAVKEAFSKVKVGQPREEGTQVGPIISKKQFDQVQDYIDKGINEGAELFYGGPGKPEGLDKGYFARPTIFINVDNHMTIAQEEIFGPVMSVITYNNLDEAIEIANDTKYGLAGYVIGKDKDTLRHVARSIEAGTIEI 433          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.538e-45
Identity = 100/243 (41.15%), Postives = 140/243 (57.61%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+PPG LNVV G  P  G AL +   V K++FTG    GK +   AA + +K V+LELGG +P I+FDDAD+D AV+    A F N GQ C   +R  V + +YD+F E       +  VGD F+ G  QGP I+    +KV  +++  +   A +  GG R      F +PTV  DV D+M+++++EIFGPV  +++FK  +D IR AN T  GLAA +FT S   +  +  AL  G V +
Sbjct:  241 AGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPT-VKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGV 482          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL8A1_DANRE (Aldehyde dehydrogenase family 8 member A1 OS=Danio rerio GN=aldh8a1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.315e-45
Identity = 102/249 (40.96%), Postives = 141/249 (56.63%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG--DRLGNR-----GYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AG PPGV+N+V G GP AG AL SH DV  +SFTG   T +++ E +A  + K ++LELGGK+P IIF DAD++Q +     + F NQG+ C   SR +V   VY EF+ +      R   G P     + G  I  E  +KV  YI   +   A + CG   D+L        GYF+ PT+ S VKD   + Q+EIFGPV  +  F E ++VI RAN  R+GL+A V+++     + + R L+AG VW
Sbjct:  197 AGFPPGVVNIVFGTGPRAGDALVSHPDVPLISFTGSTATARLITERSAP-HCKKLSLELGGKNPAIIFADADMEQCISTTVRSSFSNQGEICLCTSRIFVERSVYPEFLTRFVEATRRWKTGVPSDPSNDNGALISKEHLQKVKGYITLALAEGAQVHCGEGVDKLALPQQNIGGYFMLPTIISGVKDSSALMQEEIFGPVTCVTPFDEEEEVISRANNVRYGLSATVWSRDVGRVHRVARKLQAGLVW 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB2_RHIME (Betaine aldehyde dehydrogenase 2 OS=Rhizobium meliloti GN=betB2 PE=3 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.260e-44
Identity = 99/243 (40.74%), Postives = 139/243 (57.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLPPGV N+V G G   GA LA+H  + K+S TG   TG  V   AA + ++PVT+ELGGKS  I+FDDADV+ AV  A    FY+ GQ C  G+R ++   + + F+ +  AR     +GDP     + GP +      +V  Y+       A       +L     + +P VF++V D M +A++E+FGPV ++L F +  DV+ RAN T FGLAAG+FT+    A+ +   L AGTVWI
Sbjct:  197 AGLPPGVFNIVQGAGDV-GAELATHPAIAKVSLTGSVKTGARVAS-AAMAGIRPVTMELGGKSALIVFDDADVEAAVSGAILGNFYSAGQICSNGTRVFLQRGIREAFLARLLARVAALKIGDPMDEETDIGPLVSAAHRNRVATYVARAEVEGAYQMAPPRKLPPGDAWHEPVVFTNVTDWMTLAREEVFGPVMAVLDFDDEQDVVARANATDFGLAAGIFTRDLVRAHRLAAELEAGTVWI 437          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDA_STAES2.998e-4641.06Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAEQ2.998e-4641.06Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALD1_STAHJ6.680e-4641.63Putative aldehyde dehydrogenase SH0913 OS=Staphylo... [more]
DHA2_RALEH8.724e-4644.44Acetaldehyde dehydrogenase 2 OS=Ralstonia eutropha... [more]
GABD_ECOLI1.139e-4541.98Succinate-semialdehyde dehydrogenase [NADP+] OS=Es... [more]
ALD1_STAES1.139e-4540.82Putative aldehyde dehydrogenase SE_1720 OS=Staphyl... [more]
ALD1_STAEQ1.139e-4540.82Putative aldehyde dehydrogenase SERP1729 OS=Staphy... [more]
SSDH_ARATH2.538e-4541.15Succinate-semialdehyde dehydrogenase, mitochondria... [more]
AL8A1_DANRE3.315e-4540.96Aldehyde dehydrogenase family 8 member A1 OS=Danio... [more]
BETB2_RHIME1.260e-4440.74Betaine aldehyde dehydrogenase 2 OS=Rhizobium meli... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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