CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_MYCTU (Probable aldehyde dehydrogenase OS=Mycobacterium tuberculosis GN=Rv0458 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.260e-44
Identity = 109/253 (43.08%), Postives = 152/253 (60.08%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADV------DQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDR--LG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            LPPGV+NVV+G+G  AG  LAS   + K++FTG   TG+++ + A+  NL PVTLELGGKSP I F D         D+A+E    FAL  NQG+ C   SR+ +   +YDEF+E A  R      GDP  +    G Q   +Q EKVL YI  G +  A +  GG+R  LG   + GY++QPT+F+   ++M I ++EIFGPV ++  F + DD I  AN T +GL AGV+++  +TA    R ++AG VW+
Sbjct:  209 LPPGVVNVVNGFGAEAGKPLASSDRIAKVAFTGETTTGRLIMQYASH-NLIPVTLELGGKSPNIFFADVLAAHDDFCDKALEGFTMFAL--NQGEVCTCPSRSLIQADIYDEFLELAAIRTKAVRQGDPLDTETMLGSQASNDQLEKVLSYIEIGKQEGAVIIAGGERAELGGDLSGGYYMQPTIFTGT-NNMRIFKEEIFGPVVAVTSFTDYDDAIGIANDTLYGLGAGVWSRDGNTAYRAGRDIQAGRVWV 457          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_MYCBO (Probable aldehyde dehydrogenase OS=Mycobacterium bovis GN=Mb0467 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.260e-44
Identity = 109/253 (43.08%), Postives = 152/253 (60.08%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADV------DQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDR--LG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            LPPGV+NVV+G+G  AG  LAS   + K++FTG   TG+++ + A+  NL PVTLELGGKSP I F D         D+A+E    FAL  NQG+ C   SR+ +   +YDEF+E A  R      GDP  +    G Q   +Q EKVL YI  G +  A +  GG+R  LG   + GY++QPT+F+   ++M I ++EIFGPV ++  F + DD I  AN T +GL AGV+++  +TA    R ++AG VW+
Sbjct:  209 LPPGVVNVVNGFGAEAGKPLASSDRIAKVAFTGETTTGRLIMQYASH-NLIPVTLELGGKSPNIFFADVLAAHDDFCDKALEGFTMFAL--NQGEVCTCPSRSLIQADIYDEFLELAAIRTKAVRQGDPLDTETMLGSQASNDQLEKVLSYIEIGKQEGAVIIAGGERAELGGDLSGGYYMQPTIFTGT-NNMRIFKEEIFGPVVAVTSFTDYDDAIGIANDTLYGLGAGVWSRDGNTAYRAGRDIQAGRVWV 457          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.665e-44
Identity = 102/252 (40.48%), Postives = 153/252 (60.71%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG-----DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            +P GV+NVV+G+G  AG ALA+   +DKL+FTG  + G  + + AA  NL P T+ELGGKSP I F      +D  +D+ +E A  A F+NQG+ C   SR  VHE +Y++F+ K   R      G+P  +  + G Q+  EQ++K+L YI+ G +  A L  GG     +   + GY+++PT+F    + M I Q+EIFGPV +I KFK+  + +  AN T +GL AGV+T+  + A+ M + ++AG VW+
Sbjct:  208 IPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAA-DNLIPSTIELGGKSPNIYFPDIFSHEDQYLDKCIEGALLA-FFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGAELIFGGHPNNQENYLSGGYYIKPTLFFG-HNQMHIFQEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRMAKNIKAGRVWV 456          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.665e-44
Identity = 102/252 (40.48%), Postives = 153/252 (60.71%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG-----DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            +P GV+NVV+G+G  AG ALA+   +DKL+FTG  + G  + + AA  NL P T+ELGGKSP I F      +D  +D+ +E A  A F+NQG+ C   SR  VHE +Y++F+ K   R      G+P  +  + G Q+  EQ++K+L YI+ G +  A L  GG     +   + GY+++PT+F    + M I Q+EIFGPV +I KFK+  + +  AN T +GL AGV+T+  + A+ M + ++AG VW+
Sbjct:  208 IPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAA-DNLIPSTIELGGKSPNIYFPDIFSHEDQYLDKCIEGALLA-FFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGAELIFGGHPNNQENYLSGGYYIKPTLFFG-HNQMHIFQEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRMAKNIKAGRVWV 456          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH2_SCHPO (Putative succinate-semialdehyde dehydrogenase C139.05 [NADP+] OS=Schizosaccharomyces pombe GN=SPAC139.05 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.252e-44
Identity = 101/243 (41.56%), Postives = 141/243 (58.02%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTA-GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRL-GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AG P GVLNV++    +A G  L ++  V K+SFTG  + GKI+   +A S +K V++ELGG +PFI+F D  +DQAVE      F + GQ C   +R YVH+ VYDEFV K   +     VGD F S    GP I  +  +KV ++I   +   A +  GG  +  ++GYF +PTV S V  DML+A +E FGP+ S+ KF +T++VI  AN +  GLA  VFT +  T   + + L  G V
Sbjct:  207 AGFPDGVLNVITSSDASAHGKELTTNPIVRKVSFTGSTNVGKILMGQSA-STIKKVSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCGQVCVCPNRVYVHKNVYDEFVSKLTEKVKTIKVGDGFDSSSAVGPLISQDGCKKVSKHIEDAVSKGAKITVGGKEISSSKGYFFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSDVGLAGYVFTNNLSTMIHVAKELEVGLV 448          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.252e-44
Identity = 108/252 (42.86%), Postives = 148/252 (58.73%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD------ADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNR-----GYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            LP GV+NVV+G+G  AG  LAS   + K++FTG  +TG+++   AA  NL PVTLELGGKSP I FDD      A +D+AVE +  FAL  NQG+ C   SR  + E +YD F+E+A  R     +G P   G   G Q   EQ +K+L Y+  G    A +  GG+R G R     G++V+PT+F    + M I Q+EIFGPV +   FK+  + +  AN T +GL AG++T+    A  M R ++AG VW
Sbjct:  218 LPEGVVNVVNGFGLEAGKPLASSPRIAKIAFTGETNTGRLIMGYAA-DNLIPVTLELGGKSPNIFFDDVMMEDDAFLDKAVEGMVMFAL--NQGEVCTCPSRALIQESIYDRFMERAVQRVEAITMGHPLDPGTMIGAQASTEQLDKILSYLDIGRAEGAEVLTGGER-GQREGLEEGFYVKPTIFKG-HNKMRIFQEEIFGPVLAAATFKDEAEALELANDTLYGLGAGLWTRDISRAYRMGRGIQAGRVW 464          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD_RHISN (Probable succinate-semialdehyde dehydrogenase [NADP+] OS=Rhizobium sp. (strain NGR234) GN=gabD PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.103e-43
Identity = 97/244 (39.75%), Postives = 138/244 (56.56%), Query Frame = 2
Query:    2 AGLPPGVLNVV-SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P GVLN+V +  G   G  L ++  V K+SFTG  + G+++    +   +K ++ ELGG +PFI+FDDAD+D AV+ A  A F N GQ C + +R YV   VY EF EK   R     VGD F   V  GP I+ E  +K+  +I   ++  A +  GG R G+ G F +PTV +DV   M +A++E FGP+  +L+F + D V+R AN T +GLAA  +  +      +  AL  G V I
Sbjct:  206 AGFPDGVLNLVYASEGDAIGRELCTNPKVRKISFTGSTEVGRLLMRQCS-DQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFRNAGQTCVSANRIYVQSGVYAEFAEKFTERVRTLKVGDGFDPNVAIGPLINQEALKKIELHISDAVQKGARVRSGGRRTGSSGTFFEPTVVTDVSKTMRLAEEETFGPLAPLLRFDDADHVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGI 448          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.052e-43
Identity = 94/249 (37.75%), Postives = 145/249 (58.23%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG--DRL-----GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AG+PPGV+N+V G GP  G AL SH +V  +SFTG   T + + +L+A  + K ++LELGGK+P IIF+DA++D+ +     + F NQG+ C   SR +V + +Y EF+++      +  VG P    V  G  I     EKV  Y++  +   A + CG   D+L        GYF+ PTV +D+KD+     +EIFGPV  ++ F   ++VI RAN  ++GLAA V++ +    + + + L++G VW
Sbjct:  197 AGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAP-HCKKLSLELGGKNPAIIFEDANLDECIPATVRSSFANQGEICLCTSRIFVQKSIYSEFLKRFVEATRKWKVGIPSDPLVSIGALISKAHLEKVRSYVKRALAEGAQIWCGEGVDKLSLPARNQAGYFMLPTVITDIKDESCCMTEEIFGPVTCVVPFDSEEEVIERANNVKYGLAATVWSSNVGRVHRVAKKLQSGLVW 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: THCA_RHOER (EPTC-inducible aldehyde dehydrogenase OS=Rhodococcus erythropolis GN=thcA PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.912e-43
Identity = 108/250 (43.20%), Postives = 145/250 (58.00%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA----DVDQAVELAHFALF-YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDR--LG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            LP GVLN+V+G+G  AG  LAS   + K++FTG   TG+++ + A++ NL PVTLELGGKSP + F D     D  Q   L  F +F  NQG+ C A SR  + E ++DEF+  A  R      GDP  +    G Q   +Q EK+L YI  G    A +  GG+R  LG   + GY+VQPTVF+   + M I Q EIFGPV S+  FK+ D+ I  AN T +GL AGV+++    A    R ++AG VW
Sbjct:  209 LPAGVLNIVNGFGVEAGKPLASSPRIKKIAFTGETTTGRLIMQYASQ-NLIPVTLELGGKSPNVFFSDVLASNDDYQDKALEGFTMFALNQGEVCTAPSRALIQEDIFDEFLAMAAIRTKAVRQGDPLDTDTMIGAQASNDQLEKILSYIEIGKAEGAKVITGGERAELGGDLSGGYYVQPTVFTG-NNKMRIFQ-EIFGPVVSVTSFKDYDEAIEIANDTLYGLGAGVWSRDGGVAYRAGRDIQAGRVW 455          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.028e-43
Identity = 96/247 (38.87%), Postives = 137/247 (55.47%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV+N+V+G G   G  LA H  V+ ++FTG    GKI+ + A     K   LE+GGK+P I+ DDAD++ A E      F + GQ C A SR  V   +Y+ F EK   R     +GD  K  V  GP     Q +  L YI  G +  A+L  GG++L N     GY+VQP +F +V  +M IAQ+EIFGPV +++K    ++ +  AN  +FGL+A +FT++     + +  + AG V I
Sbjct:  199 AGLPAGVINLVTGPGSVVGQGLAEHDGVNAVTFTGSNQVGKIIGQAALARGAK-YQLEMGGKNPVIVADDADLEAAAEAVITGAFRSTGQKCTATSRVIVQSGIYERFKEKLLQRTKDITIGDSLKEDVWMGPIASKNQLDNCLSYIEKGKQEGASLLIGGEKLENGKYQNGYYVQPAIFDNVTSEMTIAQEEIFGPVIALIKVDSIEEALNIANDVKFGLSASIFTENIGRMLSFIDEIDAGLVRI 444          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_MYCTU1.260e-4443.08Probable aldehyde dehydrogenase OS=Mycobacterium t... [more]
ALDH_MYCBO1.260e-4443.08Probable aldehyde dehydrogenase OS=Mycobacterium b... [more]
ALDH_VIBCH3.665e-4440.48Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC33.665e-4440.48Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
SSDH2_SCHPO6.252e-4441.56Putative succinate-semialdehyde dehydrogenase C139... [more]
ALDH_DEIRA6.252e-4442.86Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
GABD_RHISN3.103e-4339.75Probable succinate-semialdehyde dehydrogenase [NAD... [more]
AL8A1_HUMAN4.052e-4337.75Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
THCA_RHOER6.912e-4343.20EPTC-inducible aldehyde dehydrogenase OS=Rhodococc... [more]
ALDH1_BACSU9.028e-4338.87Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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