CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: DMPC_PSEUF (2-hydroxymuconic semialdehyde dehydrogenase OS=Pseudomonas sp. (strain CF600) GN=dmpC PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.540e-42
Identity = 96/251 (38.25%), Postives = 144/251 (57.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG-------DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G+GP +AGA L  H DV+ ++FTG   TG+ +   AAK  ++PV+ ELGGK+  I+F D D+D+A+E +  ++F N GQ C    R YV   ++DEFV + KA A   ++G P       GP I  +  EKVL Y +  ++  AT+  GG       +  G  G +VQPT+++ + D   +  +EIFGP   I  F   ++ +  AN   +GLAA ++T++   A+ +   L AG VW+
Sbjct:  197 AGVPAGVYNVVHGFGPDSAGAFLTEHPDVNAITFTGETRTGEAIMRAAAKG-VRPVSFELGGKNAGIVFADCDLDKAIEGSMRSVFANGGQVCLGTERLYVERPIFDEFVARLKAGAESLVIGTPDDPQANFGPLISLQHREKVLSYYQKAVDEGATVVTGGGVPEMPAELAG--GAWVQPTIWTGLADGAAVVTEEIFGPCCHIRPFDREEEAVELANSLPYGLAATIWTENTSRAHRVAGQLEAGIVWV 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL8A1_BOVIN (Aldehyde dehydrogenase family 8 member A1 OS=Bos taurus GN=ALDH8A1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.540e-42
Identity = 94/249 (37.75%), Postives = 144/249 (57.83%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG--DRL-----GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AG+PPGV+N+V G GP  G AL SH +V  +SFTG   T + + +L+A  + K ++LELGGK+P +IF+DA++ + +     + F NQG+ C   SR +V   +Y EF+++    A    VG P     + G  I     EKV  YI+      A + CG   D+L        GYF+ PTV +DVKD+    ++EIFGPV  ++ F   ++VI+RAN  ++GLAA V++ +    + + + L++G VW
Sbjct:  197 AGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERIMQLSAP-HCKKLSLELGGKNPAVIFEDANLAECIPTTVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEAARMWKVGIPSDPSADMGALISKAHLEKVRSYIKKARMEGAQILCGEGVDKLNLPPRNQAGYFMLPTVITDVKDESCCMKEEIFGPVTCVVPFDSEEEVIQRANNVKYGLAATVWSGNVGRVHRVAKKLQSGLVW 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL8A1_MOUSE (Aldehyde dehydrogenase family 8 member A1 OS=Mus musculus GN=Aldh8a1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.011e-42
Identity = 94/249 (37.75%), Postives = 141/249 (56.63%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG--DRLG-----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AG+PPGV+N+V G GP  G AL SH +V  +SFTG   T + + +L+A  + K ++LELGGK+P IIF+DA++++ +     + F NQG+ C   SR +V   +Y EF+++      +  VG P       G  I     EKV  Y+       A + CG   D+L        GYF+ PTV +D+KD+     +EIFGPV  ++ F   ++VI RAN  R+GLAA V++K     + + + L++G VW
Sbjct:  197 AGVPPGVINIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAP-HCKKLSLELGGKNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEATRKWKVGVPSDPSANMGALISKAHLEKVRSYVLKAQTEGARILCGEGVDQLSLPLRNQAGYFMLPTVITDIKDESRCMTEEIFGPVTCVVPFDSEEEVITRANSVRYGLAATVWSKDVGRIHRVAKKLQSGLVW 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.643e-42
Identity = 98/244 (40.16%), Postives = 139/244 (56.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GVLNVV+G+G  AG AL+ H D+D ++FTG   TGK + + A  SN+K V LE GGKS  I+F D  D+ QA       +FYNQGQ C AG+R  + E + DEF+   K +A     G P       G  ID    + V  +IR G ES   L   G   G     + PT+F DV  +  ++++EIFGPV  + +F   +  ++ AN +++GL A V+T+    A+ M R L+AG+V++
Sbjct:  210 AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREG-ESKGQLLLDGRNAG-LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFV 451          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AMNC_PSESP (2-aminomuconic 6-semialdehyde dehydrogenase OS=Pseudomonas sp. GN=amnC PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.304e-41
Identity = 91/248 (36.69%), Postives = 137/248 (55.24%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG--DRLG---NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G+PPGV N+V G+GP +AG  ++ H D+  ++FTG   TG  +   AA+  +KPV+ ELGGK+  +IF D D ++ ++    ALF N GQ C    R YV   ++D F      R     V  P ++  + GP I  +  +KVL Y     +  AT   GG   R G   + G +V+PTV + + DD  + ++EIFGP+  +  F    +VIRRAN TR+GLAA ++T +   A+ +   +R G  W+
Sbjct:  196 GIPPGVFNLVHGFGPNSAGEFISQHPDISAITFTGESKTGSTIMRAAAEG-VKPVSFELGGKNAAVIFADCDFEKMLDGMMRALFLNSGQVCLCSERVYVERPIFDRFCVALAERIKALKVDWPHETDTQMGPLISSKHRDKVLSYFELARQEGATFLAGGGVPRFGDERDNGAWVEPTVIAGLSDDARVVREEIFGPICHVTPFDSESEVIRRANDTRYGLAATIWTTNLSRAHRVSELMRVGISWV 442          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ERWCT (Gamma-aminobutyraldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=ECA1542 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.703e-41
Identity = 97/242 (40.08%), Postives = 132/242 (54.55%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYI-RSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            LP GV+N+V G G   G AL  H  V+ +S TG   TG  +    A S +K   +ELGGK+P I+FDDAD+DQ V+      FYN GQ C A  R YV   VYDE VE          +GDP     E GP I   Q E+V+ ++ R+    + T+  GG+R+   G++ QPTV +  K D  I Q E+FGPV SI  F +   VI  AN + +GLA+ V+T+    A+ +   L+ G  W+
Sbjct:  192 LPAGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILAHTAAS-VKRTHMELGGKAPVIVFDDADIDQVVDGIRSFGFYNAGQDCTAACRLYVQRAVYDEVVEALGKAVATLKIGDPRDETTELGPLITEPQLERVMGFVERAKALPHITVVTGGERVKGTGFYFQPTVLAGAKQDDEIVQKEVFGPVISITSFDDEAQVIGWANASNYGLASSVWTRDIGRAHRLAACLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_PECCP (Gamma-aminobutyraldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_1415 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.793e-41
Identity = 95/242 (39.26%), Postives = 135/242 (55.79%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYI-RSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            LP GV+N+V G G   G AL  H  V+ +S TG   TG  +    A S++K   +ELGGK+P I+FDDAD+DQ V+      FYN GQ C A  R YV   VYD+ VE          +GDP     E GP I  +Q E+V+ ++ R+    + T+  GG+R+  +G++ QPTV +  K +  I Q E+FGPV SI  F +   VI  AN + +GLA+ V+T+    A+ +   L+ G  W+
Sbjct:  192 LPAGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILSHTA-SSVKRTHMELGGKAPVIVFDDADIDQVVDGIRSFGFYNAGQDCTAACRLYVQRAVYDKVVEALGNAVATLKMGDPHDETTELGPLITEQQLERVVGFVERAKALPHITVVTGGERVKGQGFYFQPTVLAGAKQEDEIVQKEVFGPVISITPFDDEAQVIGWANASHYGLASSVWTRDIGRAHRLAACLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.104e-40
Identity = 99/252 (39.29%), Postives = 149/252 (59.13%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVELAHFALF-YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG-----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            LPPGV+NVV+G G   G  LA+   + K++FTG  + G+ + + A + N+ PVTLELGGKSP I F      +DA  D+A+E   FALF +NQG+ C   SR  V E +Y+ F+E+A  R      G+P  S  + G Q+   Q E +L YI  G +  A +  GG R         GY+++PT+    +++M + Q+EIFGPV ++  FK  ++ +  AN T++GL AGV++++ + A  M R ++AG VW
Sbjct:  214 LPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQ-NIIPVTLELGGKSPNIFFADVMDEEDAFFDKALE--GFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFG-QNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVW 461          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_ORYSJ (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.211e-40
Identity = 93/243 (38.27%), Postives = 133/243 (54.73%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P G +NVV G  P  G AL     V K++FTG    GK +   +A + +K V+LELGG +P I+FDDAD+D A++ +  A F N GQ C   +R  V E +Y++F            VG+  +    QGP I+    +KV ++I       A +  GG R      F +PTV  +V +DML+ ++E+FGPV  ++ FK  +D IR AN T  GLAA +FTKS   +  +  AL  G V +
Sbjct:  242 AGIPAGAINVVMGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGSANT-VKKVSLELGGNAPCIVFDDADIDVAIKGSLAAKFRNSGQTCVCANRILVQEGIYEKFASAFIKAVQSLKVGNGLEESTSQGPLINEAAVQKVEKFINDATSKGANIMLGGKRHSLGMSFYEPTVVGNVSNDMLLFREEVFGPVAPLVPFKTEEDAIRMANDTNAGLAAYIFTKSIPRSWRVSEALEYGLVGV 483          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA1_BACHD (1-pyrroline-5-carboxylate dehydrogenase 1 OS=Bacillus halodurans GN=rocA1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.342e-40
Identity = 93/247 (37.65%), Postives = 131/247 (53.04%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     ++FTG  D G  + E AA     +++LK V +E+GGK   ++  DAD+D A E    + F   GQ C AGSR  +H+ VYDE +EK  A A    VGDP       GP ID + FEK++ YI  G +    L  GG+   + G+F+QPT+ +D+  + +I Q+EIFGPV +  K  + D  +  AN T +GL   V T++        R    G ++
Sbjct:  224 AGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIG-KKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 469          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DMPC_PSEUF1.540e-4238.252-hydroxymuconic semialdehyde dehydrogenase OS=Pse... [more]
AL8A1_BOVIN1.540e-4237.75Aldehyde dehydrogenase family 8 member A1 OS=Bos t... [more]
AL8A1_MOUSE2.011e-4237.75Aldehyde dehydrogenase family 8 member A1 OS=Mus m... [more]
PUUC_ECOLI7.643e-4240.16Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
AMNC_PSESP1.304e-4136.692-aminomuconic 6-semialdehyde dehydrogenase OS=Pse... [more]
ABDH_ERWCT1.703e-4140.08Gamma-aminobutyraldehyde dehydrogenase OS=Erwinia ... [more]
ABDH_PECCP3.793e-4139.26Gamma-aminobutyraldehyde dehydrogenase OS=Pectobac... [more]
ALDB_ECOLI1.104e-4039.29Aldehyde dehydrogenase B OS=Escherichia coli (stra... [more]
SSDH_ORYSJ3.211e-4038.27Succinate-semialdehyde dehydrogenase, mitochondria... [more]
ROCA1_BACHD9.342e-4037.651-pyrroline-5-carboxylate dehydrogenase 1 OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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