CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: XYLG_PSEPU (2-hydroxymuconic semialdehyde dehydrogenase OS=Pseudomonas putida GN=xylG PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.081e-39
Identity = 94/250 (37.60%), Postives = 138/250 (55.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYG-PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD------RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G+G  +AGA L  H DVD  +FTG   TG+ +   AAK  ++ V+LELGGK+  I+F D D+D+A+E    + F N GQ C    R YV   ++D FV + KA A    +G+P       GP I  +  EKV  Y +  ++  AT+  GG        L   G +VQPT+++ + DD  +  +EIFGP   I  F   ++ I  AN   +GLA+ ++T++   A+ +   + AG VW+
Sbjct:  197 AGVPAGVYNVVHGFGGDSAGAFLTEHPDVDAYTFTGETGTGETIMRAAAKG-VRQVSLELGGKNAGIVFADCDMDKAIEGTLRSAFANCGQVCLGTERVYVERPIFDAFVARLKAGAEALKIGEPNDPEANFGPLISHKPREKVPSYYQQAVDDGATVVTGGGVPEMPAHLAG-GAWVQPTIWTGLADDSAVVTEEIFGPCCHIRPFDSEEEAIELANSLPYGLASAIWTENVRRAHRVAGQIEAGIVWV 444          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD_BACSU (Succinate-semialdehyde dehydrogenase [NADP+] OS=Bacillus subtilis GN=gabD PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.081e-39
Identity = 93/228 (40.79%), Postives = 132/228 (57.89%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG--DRLGNRG-YFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKS 676
            AG+P  VL VV G G   G    S   + K++FTG    GKI+ + +A + +K V++ELGG +P I+ +DAD+D AVE A  + + N GQ C   +R  VHE + DEF  K   +  +  VG+  + GV  GP I+   FEK++  I   +E  A +  GG  DR  ++G YFV PTV +DV   M I  +E FGPV  I+ F + D+ I+ AN T +GLAA  FT++
Sbjct:  176 AGIPKDVLQVVIGDGEEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADT-VKHVSMELGGHAPLIVDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKVGNGLEEGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNPTVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFTEN 402          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACSU (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus subtilis GN=rocA PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.550e-39
Identity = 93/230 (40.43%), Postives = 127/230 (55.22%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKS 676
            AGLP GVLN + G G   G  L  H     +SFTG    G  + E AAK       LK V  E+GGK   ++  DAD+D A     ++ F   GQ C AGSR  +H+ VYDE VEKA A      VG+P       GP I    + KV++YI  G +S   L  GG+   ++GYF+QPT+F+DV ++  + Q+EIFGPV +I K ++ D ++  AN T +GL   + TK+
Sbjct:  224 AGLPNGVLNYIPGDGAEIGDFLVEHPKTRFVSFTGSRAVGCRIYERAAKVQPGQKWLKRVIAEMGGKDTVLVDKDADLDLAASSIVYSAFGYSGQKCSAGSRAVIHQDVYDEVVEKAVALTKTLTVGNPEDPDTYMGPVIHEASYNKVMKYIEIG-KSEGKLLAGGEGDDSKGYFIQPTIFADVDENARLMQEEIFGPVVAICKARDFDHMLEIANNTEYGLTGALLTKN 452          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.550e-39
Identity = 93/246 (37.80%), Postives = 135/246 (54.88%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDR-----LGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AG P GV+N+V G G   G  +A+H D+D ++FTG    GK V   A +   K   LE+GGK+P I+  DAD+D AVE        + GQ C A SR ++   VY+ F  K   R  +  +G+   +    GP     QF  VL YI  G    A L  GG+R     L N G+FV+PT+F DV   M IA++EIFGPV ++++    ++ I+ AN T +GL+A ++TK+   A   ++ + AG +
Sbjct:  199 AGFPKGVVNMVCGSGSVVGQGIANHPDIDGVTFTGSNTVGKQVGRAAFERGAK-YQLEMGGKNPVIVAKDADLDLAVEGTISGGLRSTGQKCTATSRVFIEREVYEPFKAKLLERVKQLKIGNGLDAETWMGPCASESQFHTVLSYIEKGKSEGAKLIYGGNRCLEGELAN-GFFVEPTIFEDVDLQMTIAREEIFGPVLALIQVDSIEEAIKLANDTEYGLSASIYTKNIGNALEFIKDIEAGLI 442          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACP2 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=rocA PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 89/247 (36.03%), Postives = 126/247 (51.01%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     ++FTG  + G  + E AAK      +LK V  E+GGK   ++ +DADV+ A      + F   GQ C AGSR  VHE++YD+ +E+ K     +   +P  + V  GP ID   F+K+  YI  G +    L  GG      GYF+ PTVF+D++    + Q+EIFGPV +  K    D+ +  AN T +GL   V T + D  N   +    G ++
Sbjct:  224 AGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQQHLKRVIAEMGGKDTVVVDEDADVELAANAIFTSAFGFSGQKCSAGSRAVVHEKLYDQVIERVKEITETKTTANPLSADVYMGPVIDQASFDKITDYIEVG-KQEGRLVTGGTSDDTEGYFIHPTVFADLEPTSRLMQEEIFGPVLAFSKVSSFDEALEVANNTEYGLTGAVITNNRDHINRAKQEFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACLD (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rocA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.909e-39
Identity = 89/247 (36.03%), Postives = 131/247 (53.04%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            +GLP GV+N V G G   G  L  H     ++FTG  + G  + E AAK     ++LK V  E+GGK   ++ +D D++ A +    + F   GQ C AGSR  VHE+VYDE +++       + VG+P  + V  GP ID   F K++ YI  G E    L  GG    ++GYF++PT+F+D+     + Q+EIFGPV +  K    D+ +  AN T +GL   V TK+ D  N   +    G ++
Sbjct:  225 SGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKE-EGRLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLY 470          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_CITK8 (Gamma-aminobutyraldehyde dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=CKO_01478 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38
Identity = 90/241 (37.34%), Postives = 125/241 (51.87%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSG-IESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ + +  A S +K   +ELGGK+P I+FDDAD+D  VE      FYN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +       +  +  GG +L   GY+  PT+ +  K +  I Q E+FGPV S+  F + + V+  AN T++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PPGVLNVLFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIIQHTAPS-IKRTHMELGGKAPVIVFDDADLDAVVEGVRTFGFYNAGQDCTAACRIYAQKGIYDALVEKLGAAVASLKTGSPNDESTELGPLSSQAHLERVTKAVEEAKALGHINVVTGGQKLDGAGYYFAPTLLAGAKQEDAIVQREVFGPVVSMTVFDDEEQVLAWANDTQYGLASSVWTKDVGRAHRLSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH1_SCHPO (Putative succinate-semialdehyde dehydrogenase C1002.12c [NADP+] OS=Schizosaccharomyces pombe GN=SPAC1002.12c PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 88/243 (36.21%), Postives = 137/243 (56.38%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTA-GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AG+P GVLN+V+   P+  G  L ++  + K+SFTG  + GKI+ + ++ S LK ++LELGG +PFI+F+DAD+++A +      F   GQ C   +R YVH  VYD FV+    R  +  +G    +GV  GP I  +   KV +++   ++    +  GG    N G  + +PTV  + K  MLI+++E FGPV ++ KF   D+V+  AN +  GLA  +F+K       +  AL+ G V
Sbjct:  212 AGVPAGVLNMVTANSPSEHGIELTTNPLIRKVSFTGSTNVGKILAKQSS-STLKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSGQTCVCANRIYVHSSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHVEDAVQKGGVVVTGGKVASNLGPMYFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWANDSPVGLAGYLFSKDISRVFRVGEALQVGMV 453          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA2_BACHD (1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus halodurans GN=rocA2 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 92/247 (37.25%), Postives = 129/247 (52.23%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     ++FTG  D G  + E AA     + +LK V +E+GGK   ++  DAD+D A +    + F   GQ C AGSR  +H+ VYD  +EKA A   +  VG+P    V  GP +D   F K++ YI  G E    L  GG+   ++G+F+QPT+F+DV     I Q+EIFGPV +  K ++ D  +  AN T +GL   V T +        R    G ++
Sbjct:  224 AGLPKGVVNFVPGSGTDIGDYLIDHPKTSLITFTGSRDVGVRLYERAAVVHPGQQHLKRVIVEMGGKDTVVVDKDADLDLAAQSIVTSAFGFSGQKCSAGSRAVIHQDVYDVVLEKAVALTKQLSVGEPTAPDVYMGPVVDQGAFSKIMSYIEVGKE-EGRLMVGGEGDDSKGFFIQPTIFADVDPHARIMQEEIFGPVVAFSKARDFDHALEIANNTEYGLTGAVITTNRHHIEKAKRDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALPC (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=ydcW PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38
Identity = 90/241 (37.34%), Postives = 125/241 (51.87%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+FDDAD+D A +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP       ++V   +      S+  +  GG +   +GY+  PT+ +D K +  I Q E+FGPV SI  F + D V+R AN +R+GLA+ V+T+    A+ +   L+ G  WI
Sbjct:  193 PPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSISTGEHILRHTAPA-IKRTHMELGGKAPVIVFDDADLDAAAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWI 432          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
XYLG_PSEPU2.081e-3937.602-hydroxymuconic semialdehyde dehydrogenase OS=Pse... [more]
GABD_BACSU2.081e-3940.79Succinate-semialdehyde dehydrogenase [NADP+] OS=Ba... [more]
ROCA_BACSU3.550e-3940.431-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ALDH_BACST3.550e-3937.80Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
ROCA_BACP26.056e-3936.031-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACLD7.909e-3936.031-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ABDH_CITK81.349e-3837.34Gamma-aminobutyraldehyde dehydrogenase OS=Citrobac... [more]
SSDH1_SCHPO3.005e-3836.21Putative succinate-semialdehyde dehydrogenase C100... [more]
ROCA2_BACHD5.126e-3837.251-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacil... [more]
ABDH_SALPC6.695e-3837.34Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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