CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALCH (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella choleraesuis GN=ydcW PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.142e-37
Identity = 90/241 (37.34%), Postives = 125/241 (51.87%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+FDDAD+D A +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP       ++V   +      S+  +  GG +   +GY+  PT+ +D K +  I Q E+FGPV SI  F + D V+R AN +R+GLA+ V+T+    A+ +   L+ G  WI
Sbjct:  193 PPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPA-IKRTHMELGGKAPVIVFDDADLDAAAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWI 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_RAT (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 96/248 (38.71%), Postives = 138/248 (55.65%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+PPGV NV+      A   G  L +   V K+SFTG   TGKI+   AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   +R  V   ++D FV K  A AM++   VG+ F+ G  QGP I+ +  EKV +++   +   AT+  GG R  + G F +PT+ S+V  DML   +E FGPV  ++KF + ++ +  AN    GLA   +++       +   L  G V +
Sbjct:  235 AGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKF-AEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGNFFEPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 480          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALAR (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ydcW PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 87/241 (36.10%), Postives = 126/241 (52.28%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGV+NV+ G G T G AL  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+F+DAD+D   +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP        +V   +      S+  +  GG + G +GY+  PT+ +D K +  I Q E+FGPV SI  F + + V+R AN++R+GLA+ V+T+    A+ +   L+ G  W+
Sbjct:  193 PPGVINVLFGRGQTVGDALTGHEKVRMVSLTGSIATGEHILRHTAPA-IKRTHMELGGKAPVIVFNDADLDAVAQGIRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGQAVSSLKMGAPEDESTELGPLSSQAHLARVTAAVEEAKALSHIRVIAGGRQTGGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITAFDDEEQVLRWANESRYGLASSVWTQDVGRAHRLSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH5_BACSU (Putative aldehyde dehydrogenase yfmT OS=Bacillus subtilis GN=yfmT PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 89/244 (36.48%), Postives = 133/244 (54.51%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT-LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P G+LNVV       G +   H     +SFTG    G  + +LA K   KP+ LELGG S FI+ +DAD++ AV  A F+ F +QGQ C + +R  VH  +YD+F+E  +A+     VGDP       GP I+  Q + +++ +   IE  A  ++ G    G  G  V+PT+  DVK  M IA++E+FGPV S +KF   D+ +  AN+T FGL+  V T + +      + +  G + +
Sbjct:  197 AGIPAGLLNVVVTDIAEIGDSFVEHPVPRIISFTGSTKVGSYIGQLAMKHFKKPL-LELGGNSAFIVLEDADIEYAVNAAVFSRFTHQGQICMSANRVLVHSSIYDKFLELYQAKVESLKVGDPMDPDTIIGPLINSRQTDGLMKTVEQAIEEGAVPVKLG----GFNGTIVEPTILKDVKPFMSIAKEELFGPVVSFMKFDSEDEAVDIANETPFGLSGAVHTSNLERGVAFAKRIETGMIHV 435          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALTY (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella typhimurium GN=ydcW PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 89/241 (36.93%), Postives = 124/241 (51.45%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+FDDAD+D   +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP       ++V   +      S+  +  GG +   +GY+  PT+ +D K +  I Q E+FGPV SI  F + D V+R AN +R+GLA+ V+T+    A+ +   L+ G  WI
Sbjct:  193 PPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPA-IKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWI 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALTI (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella typhi GN=ydcW PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 89/241 (36.93%), Postives = 124/241 (51.45%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+FDDAD+D   +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP       ++V   +      S+  +  GG +   +GY+  PT+ +D K +  I Q E+FGPV SI  F + D V+R AN +R+GLA+ V+T+    A+ +   L+ G  WI
Sbjct:  193 PPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPA-IKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDKSTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWI 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDA_ECOLI (Lactaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=aldA PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 84/243 (34.57%), Postives = 132/243 (54.32%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF-KSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            GLP GV N+V G G T G  LA +  V  +S TG    G+ +   AAK N+  V LELGGK+P I+ DDAD++ AV+    +   N GQ C    R YV + +YD+FV +          G+P  ++ +  GP I+    E+V + +   +E  A +  GG  +  +GY+  PT+  DV+ +M I  +E FGPV  ++ F   +D I  AN + +GL + ++T++ + A   ++ L+ G  +I
Sbjct:  196 GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYI 437          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALPB (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ydcW PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 88/241 (36.51%), Postives = 124/241 (51.45%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+FDDAD+D   +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP       ++V   +      S+  +  GG +   +GY+  PT+ +D + +  I Q E+FGPV SI  F + D V+R AN +R+GLA+ V+T+    A+ +   L+ G  WI
Sbjct:  193 PPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPA-IKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGTPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADARQEDAIVQREVFGPVVSITVFDDEDQVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWI 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ENT38 (Gamma-aminobutyraldehyde dehydrogenase OS=Enterobacter sp. (strain 638) GN=Ent638_2124 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 87/241 (36.10%), Postives = 127/241 (52.70%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYI-RSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GVLNV+ G G T G  L  H  V  +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD+D  VE      FYN GQ C A  R Y  + +Y + VEK  A       G P     E GP       E+V + +  +    +  +  GG ++   GYF +PT+ +  K +  I Q E+FGPV S+ +F + + V+  AN +++GLA+ V+T+    A+ M   L+ G  W+
Sbjct:  193 PAGVLNVLFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQKGIYPQLVEKLGAAVATLKTGAPEDESTELGPLSSAAHLERVCKAVDEAKALGHVNVVTGGKKVEGGGYFFEPTLLAGAKQEDAIVQREVFGPVVSMTEFDDEEQVLAWANDSQYGLASSVWTQDVGRAHRMSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_OCEIH (1-pyrroline-5-carboxylate dehydrogenase OS=Oceanobacillus iheyensis GN=rocA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 90/247 (36.44%), Postives = 128/247 (51.82%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GVLN V G     G  L  H D   ++FTG   TG  + E A K     ++LK +  E+GGK   I+ + AD+D A E    + F   GQ C A SR  +HE VYDE +EK+   A    VG+P +  V     ++ +QF+K+  YI  G +    L  GG+   N+G+FV PT+F D+     I Q+EIFGPV +  K K  D+++  AN T +GL   V + + +  N        G ++
Sbjct:  224 AGLPKGVLNFVPGDPAEIGDYLVDHKDTHFINFTGSRATGVRIFERATKIQDGQTHLKRIVAEMGGKDTIIVDESADLDLAAESIVHSAFGFSGQKCSACSRAVIHESVYDEVIEKSVELAKTLTVGNPTEDNVYMASVVNQKQFDKIKDYIEVG-KQEGELVFGGETDDNKGFFVHPTIFKDLDPKARIMQEEIFGPVVAFSKAKSFDELLDIANNTEYGLTGAVISNNRENLNRAQTEFLVGNLY 469          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABDH_SALCH1.142e-3737.34Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
SSDH_RAT1.948e-3738.71Succinate-semialdehyde dehydrogenase, mitochondria... [more]
ABDH_SALAR1.948e-3736.10Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ALDH5_BACSU3.323e-3736.48Putative aldehyde dehydrogenase yfmT OS=Bacillus s... [more]
ABDH_SALTY3.323e-3736.93Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ABDH_SALTI3.323e-3736.93Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ALDA_ECOLI4.340e-3734.57Lactaldehyde dehydrogenase OS=Escherichia coli (st... [more]
ABDH_SALPB5.668e-3736.51Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ABDH_ENT385.668e-3736.10Gamma-aminobutyraldehyde dehydrogenase OS=Enteroba... [more]
ROCA_OCEIH7.402e-3736.441-pyrroline-5-carboxylate dehydrogenase OS=Oceanob... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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