CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: FEAB_ECOLI (Phenylacetaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=feaB PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 87/243 (35.80%), Postives = 128/243 (52.67%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV+G G   GAAL SH  V K+SFTG   TGK +   AA  +L  VTLELGGK+P I+  DAD    +E      F NQGQ C A SR Y+   ++D  V   +       VG       +  P +     +KV  ++       A L  G +     GY+V PT+  +    + + ++E+FGPV ++++  + ++ ++ AN T +GL A V+T++   A      L+AGTVW+
Sbjct:  216 AGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAA-DHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWV 457          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SALPA (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi A GN=ydcW PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 88/241 (36.51%), Postives = 123/241 (51.04%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            PPGVLNV+ G G T G  L  H  V  +S TG   TG+ +    A + +K   +ELGGK+P I+FDDAD+D   +      FYN GQ C A  R Y    +YD  VEK         +G P     E GP       ++V   +      S+  +  GG +   +GY+  PT+ +D K +  I Q E+FGPV SI  F + D V+R  N +R+GLA+ V+T+    A+ +   L+ G  WI
Sbjct:  193 PPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPA-IKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWGNDSRYGLASSVWTQDVGRAHRLSARLQYGCTWI 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: UGA2_YEAST (Succinate-semialdehyde dehydrogenase [NADP+] OS=Saccharomyces cerevisiae GN=UGA2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 88/244 (36.07%), Postives = 130/244 (53.28%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYG--PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AG P G  NV+  +   P  G  L     V K++FTG  + GKI+ + ++ S LK ++ ELGG +PFI+F+DAD+DQA+E A    F   GQ C   +R YVH  + D+F +    R  + ++G         G  I+    EKV R+ +  I+  A +   G RL   G  F  P + S V    +++++E FGP+  I  F   ++V+  AN T FGLAA VF+K+ +T  T+  AL  G V
Sbjct:  206 AGFPKGSFNVILSHANTPKLGKTLCESPKVKKVTFTGSTNVGKILMKQSS-STLKKLSFELGGNAPFIVFEDADLDQALEQAMACKFRGLGQTCVCANRLYVHSSIIDKFAKLLAERVKKFVIGHGLDPKTTHGCVINSSAIEKVERHKQDAIDKGAKVVLEGGRLTELGPNFYAPVILSHVPSTAIVSKEETFGPLCPIFSFDTMEEVVGYANDTEFGLAAYVFSKNVNTLYTVSEALETGMV 448          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA2_BACSU (1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus subtilis GN=ycgN PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 83/247 (33.60%), Postives = 128/247 (51.82%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            +GLP GV+N V G G   G  L  H     ++FTG  + G  + E AAK      +LK V  E+GGK   ++ +DAD++ A +    + F   GQ C AGSR  VHE+VYD+ +E+       ++   P  + V  GP ID   ++K++ YI  G +    L  GG    ++GYF++PT+F+D+     + Q+EIFGPV +  K  + D+ +  AN T +GL   V T +        +    G ++
Sbjct:  224 SGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQQHLKRVIAEMGGKDTVVVDEDADIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDQVLERVIEITESKVTAKPDSADVYMGPVIDQGSYDKIMSYIEIG-KQEGRLVSGGTGDDSKGYFIKPTIFADLDPKARLMQEEIFGPVVAFCKVSDFDEALEVANNTEYGLTGAVITNNRKHIERAKQEFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_MOUSE (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 93/248 (37.50%), Postives = 135/248 (54.44%), Query Frame = 2
Query:    2 AGLPPGVLNVVS---GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV+          G  L +   V K+SFTG   TGKI+   AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   +R  V   ++D FV K  A AM++   VG+ F+ G  QGP I+ +  EKV + +   +   AT+  GG R  + G F +PT+ S+V  DML   +E FGP+  ++KF + ++ +  AN    GLA   +++       +   L  G V +
Sbjct:  235 AGIPAGVYNVIPCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKF-AEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQSGGNFFEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 480          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SERP5 (Gamma-aminobutyraldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=Spro_3642 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.798e-36
Identity = 88/246 (35.77%), Postives = 137/246 (55.69%), Query Frame = 2
Query:    2 AGL-PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYI-RSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGL PPGVLNV+ G G + G  L  H  V  +S TG   TG+ +    A S +K   +ELGGK+P ++FDDAD+ Q VE      FYN GQ C A  R Y  + +Y + V KA   A+  + +G P  +  E GP I  +  E+V+ ++ R+    +  +  GG+R+   GY+ QPT+ +  + +  I Q E+FGPV ++  F +   V+  AN++ +GLA+ ++T+    A+ +   L+ G  W+
Sbjct:  189 AGLFPPGVLNVLFGRGASVGDRLTGHNKVRMVSLTGSIATGEHIIGHTA-SGIKRTHMELGGKAPVLVFDDADLQQVVEGIRSFGFYNAGQDCTAACRIYAQKGIYPQLV-KALGEAIGSLKIGPPIDASSELGPLITAQHLERVVGFVERAKALPHVQVVTGGERVNGPGYYFQPTLLAGARQEDEIVQREVFGPVVTVTPFDDEAQVLAWANESDYGLASSLWTRDVGRAHRLSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: NAHF_PSEU8 (Salicylaldehyde dehydrogenase OS=Pseudomonas sp. (strain C18) GN=doxF PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 90/247 (36.44%), Postives = 135/247 (54.66%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGY---GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG-VEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GVLN ++      P    AL S  ++ +++FTG    G I+ + AA+ +LK   LELGGKSP I+ DDAD+D AV+ A F  F  QGQ C +  R  V E++ DEFV K   +  R   GDP  +G    GP + P   E++    +  I+  A + CGG     +G  +  T+   VK DM I  +E FGP+  +++ K   + +R AN + +GL++GVF +  + A  +  ++  G+V I
Sbjct:  191 AGLPAGVLNYLNSSPDRSPEIADALISAKEIRRINFTGSTRVGSIIAQKAAQ-HLKRCLLELGGKSPLIVLDDADIDAAVKAAVFGSFLFQGQICMSTERLIVDEKIADEFVAKFVEKTKRLSAGDPCVTGDCIIGPMVSPNSGERINGLFKDAIDKGAKVVCGGLA---QGALMPATILDHVKSDMRIYDEETFGPITVVIRCKGEAEAVRIANDSVYGLSSGVFGRDINRALRVGMSIEYGSVHI 433          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: NAHF_PSEPU (Salicylaldehyde dehydrogenase OS=Pseudomonas putida GN=nahF PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 90/247 (36.44%), Postives = 135/247 (54.66%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGY---GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG-VEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GVLN ++      P    AL S  ++ +++FTG    G I+ + AA+ +LK   LELGGKSP I+ DDAD+D AV+ A F  F  QGQ C +  R  V E++ DEFV K   +  R   GDP  +G    GP + P   E++    +  I+  A + CGG     +G  +  T+   VK DM I  +E FGP+  +++ K   + +R AN + +GL++GVF +  + A  +  ++  G+V I
Sbjct:  191 AGLPAGVLNYLNSSPDRSPEIADALISAKEIRRINFTGSTRVGSIIAQKAAQ-HLKRCLLELGGKSPLIVLDDADIDAAVKAAVFGSFLFQGQICMSTERLIVDEKIADEFVAKFVEKTKRLSAGDPCVTGDCIIGPMVSPNSGERINGLFKDAIDKGAKVVCGGLA---QGALMPATILDHVKSDMRIYDEETFGPITVVIRCKGEAEAVRIANDSVYGLSSGVFGRDINRALRVGMSIEYGSVHI 433          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SHISS (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella sonnei (strain Ss046) GN=ydcW PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.396e-35
Identity = 87/244 (35.66%), Postives = 126/244 (51.64%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+N++ G G T G  L  H  V  +S TG   TG+ +   AA S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHAA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACCR (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rocA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 88/247 (35.63%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V T + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVITNNRDHIEKAREDFHVGNLY 469          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FEAB_ECOLI7.402e-3735.80Phenylacetaldehyde dehydrogenase OS=Escherichia co... [more]
ABDH_SALPA9.668e-3736.51Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
UGA2_YEAST1.649e-3636.07Succinate-semialdehyde dehydrogenase [NADP+] OS=Sa... [more]
ROCA2_BACSU2.154e-3633.601-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacil... [more]
SSDH_MOUSE3.674e-3637.50Succinate-semialdehyde dehydrogenase, mitochondria... [more]
ABDH_SERP54.798e-3635.77Gamma-aminobutyraldehyde dehydrogenase OS=Serratia... [more]
NAHF_PSEU81.069e-3536.44Salicylaldehyde dehydrogenase OS=Pseudomonas sp. (... [more]
NAHF_PSEPU1.069e-3536.44Salicylaldehyde dehydrogenase OS=Pseudomonas putid... [more]
ABDH_SHISS1.396e-3535.66Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
ROCA_BACCR2.381e-3535.631-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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