CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACCQ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain Q1) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACCN (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 83/230 (36.09%), Postives = 123/230 (53.48%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKS 676
            AGLP GV+N + G G   G  L  H     +SFTG  D G  + E AAK +     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD+ + +A        VG+P + G   GP  D   F+KV+ Y+  G E    +  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + +
Sbjct:  224 AGLPAGVVNFIPGSGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEEVYDQVLNRAVELTKELTVGNPAEKGTNMGPVNDQAAFDKVMSYVAIGKE-EGKIVAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNN 452          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACC7 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH187) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACC3 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACC1 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGSGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACC0 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH820) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACAN (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACAH (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACAC (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_BACAA (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain A0248) GN=rocA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727
            AGLP GV+N V G G   G  L  H     +SFTG  D G  + E AAK N     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  +HE VYD  + +A        V +P   G   GP  D   F+KV+ Y+  G E    L  GG+   ++G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++
Sbjct:  224 AGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRIL-AGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLY 469          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ROCA_BACCQ5.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCN5.305e-3536.091-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC75.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC35.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC15.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC05.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAN5.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAH5.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAC5.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAA5.305e-3535.221-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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