CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLC (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ydcW PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+N++ G G T G  L  H  V  +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECOHS (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=ydcW PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+N++ G G T G  L  H  V  +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: XYLC_PSEPU (Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas putida GN=xylC PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 87/243 (35.80%), Postives = 130/243 (53.50%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GVL+V+ G G   G ++ ++  ++ +SFTG    G+++ E   +  LK V LELGG +  I+  DAD++ AV  A +  F +QGQ C A  R  VH  V  ++ EK   RA   +VGDP    V  GP I+ +Q  +V   + S   + A +  GG     +  + Q TV  DVK +M + + EIFGPV  I  F   ++ I  AN + +GLAA + T++  T   + + L  G V I
Sbjct:  199 AGMPDGVLHVLPG-GADVGESMVANSGINMISFTGSTQVGRLIGEKCGRM-LKKVALELGGNNVHIVLPDADLEGAVSCAAWGTFLHQGQVCMAAGRHLVHRDVAQQYAEKLALRAKNLVVGDPNSDQVHLGPLINEKQVVRVHALVESAQRAGAQVLAGGT---YQDRYYQATVIMDVKPEMEVFKSEIFGPVAPITVFDSIEEAIELANCSEYGLAASIHTRALATGLDIAKRLNTGMVHI 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSM (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 87/244 (35.66%), Postives = 124/244 (50.82%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+NV+ G G T G  L  H  V  +S TG   TG+ +    A S +K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDDSTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLI (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=ydcW PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+N++ G G T G  L  H  V  +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECODH (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=ydcW PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+N++ G G T G  L  H  V  +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECOBW (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=ydcW PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 2
Query:   11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            P GV+N++ G G T G  L  H  V  +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VEK  A       G P     E GP       E+V + +    E+ AT    +  GG++    GY+  PT+ +    D  I Q E+FGPV S+  F   + V+  AN +++GLA+ V+TK    A+ +   L+ G  W+
Sbjct:  193 PAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_PONPY (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 93/248 (37.50%), Postives = 134/248 (54.03%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV+      A   G A+ +   V K+SFTG   TGKI+   AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   ++  V   ++D FV KA A AM++   VG+ F+ G  QGP I+ +  EKV + +   +   AT+  GG R      F +PT+  +V  DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +
Sbjct:  247 AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 492          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_PANTR (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 93/248 (37.50%), Postives = 134/248 (54.03%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV+      A   G A+ +   V K+SFTG   TGKI+   AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   ++  V   ++D FV KA A AM++   VG+ F+ G  QGP I+ +  EKV + +   +   AT+  GG R      F +PT+  +V  DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +
Sbjct:  247 AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 492          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_PANPA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 93/248 (37.50%), Postives = 134/248 (54.03%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV+      A   G A+ +   V K+SFTG   TGKI+   AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   ++  V   ++D FV KA A AM++   VG+ F+ G  QGP I+ +  EKV + +   +   AT+  GG R      F +PT+  +V  DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +
Sbjct:  247 AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 492          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABDH_ECOLC5.305e-3535.25Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOHS5.305e-3535.25Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
XYLC_PSEPU6.928e-3535.80Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas p... [more]
ABDH_ECOSM6.928e-3535.66Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOLI6.928e-3535.25Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECODH6.928e-3535.25Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOBW6.928e-3535.25Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
SSDH_PONPY9.049e-3537.50Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_PANTR1.543e-3437.50Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_PANPA1.543e-3437.50Succinate-semialdehyde dehydrogenase, mitochondria... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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