CX295024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_HUMAN (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34 Identity = 93/248 (37.50%), Postives = 134/248 (54.03%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 AG+P GV NV+ A G A+ + V K+SFTG TGKI+ AA S +K V++ELGG +PFI+FD A+VDQAV A + F N GQ C ++ V ++D FV KA A AM++ VG+ F+ G QGP I+ + EKV + + + AT+ GG R F +PT+ +V DML +E FGP+ ++KF ++ I AN GLA +++ + L G V + Sbjct: 247 AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 492
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: SSDH_GORGO (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34 Identity = 93/248 (37.50%), Postives = 134/248 (54.03%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI--VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 AG+P GV NV+ A G A+ + V K+SFTG TGKI+ AA S +K V++ELGG +PFI+FD A+VDQAV A + F N GQ C ++ V ++D FV KA A AM++ VG+ F+ G QGP I+ + EKV + + + AT+ GG R F +PT+ +V DML +E FGP+ ++KF ++ I AN GLA +++ + L G V + Sbjct: 247 AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGV 492
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_GEOSW (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=rocA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34 Identity = 86/247 (34.82%), Postives = 124/247 (50.20%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727 AGLP GVLN + G G G L H +SFTG D G + E AAK + LK V E+GGK ++ +AD++ A + + F GQ C A SR + E VYD+ + + + VGDP GP ID + K++ YI G + L GG+ ++G+F+QPTVF+DV + I Q+EIFGPV + K K+ D + AN T +GL V +++ G ++ Sbjct: 224 AGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDGIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLNRVVELTKQLKVGDPADQSTFMGPVIDQSAYNKIMEYIEIG-KKEGRLMTGGEGDDSKGFFIQPTVFADVDPNARIMQEEIFGPVVAFTKAKDFDHALEIANNTEYGLTGAVISRNRANLEKAREEFHVGNLY 469
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_SHIDS (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ydcW PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34 Identity = 86/244 (35.25%), Postives = 124/244 (50.82%), Query Frame = 2 Query: 11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 P GV+NV+ G G T G L H V +S TG TG+ + A S +K +ELGGK+P I+FDDA+++ VE +YN GQ C A R Y + +YD VEK A G P E GP E+V + + E+ AT + GG++ GY+ PT+ + D I Q E+FGPV S+ F + V+ AN +++GLA+ V+TK A+ + L+ G W+ Sbjct: 193 PAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPS-IKRTHMELGGKAPVIVFDDANIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLU (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydcW PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34 Identity = 86/244 (35.25%), Postives = 124/244 (50.82%), Query Frame = 2 Query: 11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 P GV+NV+ G G T G L H V +S TG TG+ + A S +K +ELGGK+P I+FDDAD++ VE +YN GQ C A R Y + +YD VEK A G P E GP ++V + + E+ AT + GG++ GY+ PT+ + D I Q E+FGPV S+ F + V+ AN +++GLA+ V+TK A+ + L+ G W+ Sbjct: 193 PAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPS-IKLTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLDRVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECO5E (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydcW PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34 Identity = 86/244 (35.25%), Postives = 123/244 (50.41%), Query Frame = 2 Query: 11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 P GV+NV+ G G T G L H V +S TG TG+ + A S +K +ELGGK+P I+FDDAD++ VE +YN GQ C R Y + +YD VEK A G P E GP E+V + + E+ AT + GG++ GY+ PT+ + D I Q E+FGPV S+ F + V+ AN +++GLA+ V+TK A+ + L+ G W+ Sbjct: 193 PAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTVACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ECO57 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=ydcW PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34 Identity = 86/244 (35.25%), Postives = 123/244 (50.41%), Query Frame = 2 Query: 11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT----LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 P GV+NV+ G G T G L H V +S TG TG+ + A S +K +ELGGK+P I+FDDAD++ VE +YN GQ C R Y + +YD VEK A G P E GP E+V + + E+ AT + GG++ GY+ PT+ + D I Q E+FGPV S+ F + V+ AN +++GLA+ V+TK A+ + L+ G W+ Sbjct: 193 PAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTVACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVE---EAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ABDH_ESCF3 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ydcW PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34 Identity = 84/241 (34.85%), Postives = 120/241 (49.79%), Query Frame = 2 Query: 11 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGI-ESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 P GV+NV+ G G T G L H V +S TG TG+ + A S +K +ELGGK+P I+FDDAD++ VE +YN GQ C A R Y + +YD VEK A G P E GP E V + + + + GG++ GY+ PT+ + D I Q E+FGPV S+ F + V+ AN +++GLA+ V+TK A+ + L+ G W+ Sbjct: 193 PAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLEHVSKAVEEAKGTGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTAFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWV 432
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_GEOTN (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rocA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34 Identity = 85/247 (34.41%), Postives = 125/247 (50.61%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727 AGLP GVLN + G G G L H +SFTG D G + E AAK LK V E+GGK ++ +AD++ A + + F GQ C A SR + E VYD+ + + + VGDP + GP ID + K++ YI G + L GG+ ++G+F+QPTVF+DV + I Q+EIFGPV + K ++ D + AN T++GL V +++ G ++ Sbjct: 224 AGLPAGVLNYIPGSGAEVGDYLVEHPRTRFISFTGSRDVGIRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLNRVVELTKQLNVGDPAEQATFMGPVIDQGAYNKIMEYIEIG-KQEGRLMTGGEGDDSKGFFIQPTVFADVDPNARIMQEEIFGPVVAFAKARDFDHALEIANNTQYGLTGAVISRNRANLEKARHEFHVGNLY 469
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_GEOKA (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus GN=rocA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.491e-34 Identity = 85/247 (34.41%), Postives = 124/247 (50.20%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVW 727 AGLP GVLN + G G G L H +SFTG D G + E AAK + LK V E+GGK ++ +AD++ A + + F GQ C A SR + E VYD+ + + + VGDP + GP ID + K++ YI G + L GG+ +G+F+QPTVF+DV + I Q+EIFGPV + K ++ D + AN T +GL V +++ G ++ Sbjct: 224 AGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDAIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLSRVVELTKQLNVGDPAEQATFMGPVIDQNAYNKIMEYIEIG-KQEGRLMTGGEGDDAKGFFIQPTVFADVDPNARIMQEEIFGPVVAFAKARDFDHALEIANNTEYGLTGAVISRNRANLEKARHEFHVGNLY 469 The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bpback to top |