CX295024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDY_BACSU (Uncharacterized aldehyde dehydrogenase aldY OS=Bacillus subtilis GN=aldY PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.865e-34 Identity = 88/239 (36.82%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAG 718 AGLP GVLNV+ G + ++ +SFTG G+ + E+A ++ K + LELGG +PF + DADVD+AV+ A F F +QGQ C +R VH+ VYDEFVEK AR + GD GP I+ Q EK L I L G R+GN + P VF ++ IAQ E+F P+ +I+K + I AN T +GL++ VFT + + +G Sbjct: 197 AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN---VLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSG 431
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAES (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rocA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 86/228 (37.72%), Postives = 121/228 (53.07%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFT 670 AGLP GV+N V G G L H D ++FTG TG + E +A + LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ V+DE +EKA + +G+ + GP I+ +QF+K+ YI G + LE GG + GYF++PT+FS ++ I Q+EIFGPV +K K+ D+ I AN T +GL V T Sbjct: 224 AGLPQGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQQFLKRVIAEMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSRAIVHQDVHDEILEKAIQLTQKLTLGNT-EENTFMGPVINQKQFDKIKNYIEIG-KKEGKLETGGGTDDSTGYFIEPTIFSGLQSADRIMQEEIFGPVVGFIKVKDFDEAIEVANDTDYGLTGAVIT 449
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAEQ (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rocA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 86/228 (37.72%), Postives = 121/228 (53.07%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFT 670 AGLP GV+N V G G L H D ++FTG TG + E +A + LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ V+DE +EKA + +G+ + GP I+ +QF+K+ YI G + LE GG + GYF++PT+FS ++ I Q+EIFGPV +K K+ D+ I AN T +GL V T Sbjct: 224 AGLPQGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQQFLKRVIAEMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSRAIVHQDVHDEILEKAIQLTQKLTLGNT-EENTFMGPVINQKQFDKIKNYIEIG-KKEGKLETGGGTDDSTGYFIEPTIFSGLQSADRIMQEEIFGPVVGFIKVKDFDEAIEVANDTDYGLTGAVIT 449
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTU (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis GN=gabD1 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 85/245 (34.69%), Postives = 119/245 (48.57%), Query Frame = 2 Query: 5 GLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K AR VGDP + GP + +V + + + A + CGG RL G+F PTV +D+ DM + +E+FGPV S+ + D+ + AN T FGL + +T+ + + AG V+I Sbjct: 177 GFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFI 416
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gabD1 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 85/245 (34.69%), Postives = 119/245 (48.57%), Query Frame = 2 Query: 5 GLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K AR VGDP + GP + +V + + + A + CGG RL G+F PTV +D+ DM + +E+FGPV S+ + D+ + AN T FGL + +T+ + + AG V+I Sbjct: 177 GFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFI 416
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCPA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium paratuberculosis GN=gabD1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 2 Query: 95 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 + TG G+ V +A +KP LELGG PFI+ AD+D+AV+ A A N GQ C A R VH +YD FV+K + VGDP + GP +++ + + + + ATL CGG L G+F PTV +D+ DM + +E+FGPV S+ + + D+ I AN T FGL + +T A + + AG V+I Sbjct: 207 TLTGSEPAGQSVAAIAG-DEIKPTVLELGGSDPFIVMPSADLDEAVKTAVTARVQNNGQSCIAAKRFIVHTDIYDAFVDKFVEQMKALKVGDPTDPATDVGPLATESGRDEIAKQVDDAVAAGATLRCGGKPLDGPGWFYPPTVVTDITKDMALYTEEVFGPVASMYRAADIDEAIEIANATTFGLGSNAWTNDAAEQQRFIDDIEAGQVFI 417
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBP (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gabD1 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 85/245 (34.69%), Postives = 119/245 (48.57%), Query Frame = 2 Query: 5 GLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K AR VGDP + GP + +V + + + A + CGG RL G+F PTV +D+ DM + +E+FGPV S+ + D+ + AN T FGL + +T+ + + AG V+I Sbjct: 177 GFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFI 416
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBO (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis GN=gabD1 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 85/245 (34.69%), Postives = 119/245 (48.57%), Query Frame = 2 Query: 5 GLPPG---VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 G P G L V SG A A+ V + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R VH +YD+FV+K AR VGDP + GP + +V + + + A + CGG RL G+F PTV +D+ DM + +E+FGPV S+ + D+ + AN T FGL + +T+ + + AG V+I Sbjct: 177 GFPDGCFQTLLVSSG----AVEAILRDPRVAAATLTGSEPAGQSVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFI 416
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCA1 (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium avium (strain 104) GN=gabD1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 2 Query: 95 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 + TG G+ V +A +KP LELGG PFI+ AD+D+AV+ A A N GQ C A R VH +YD FV+K + VGDP + GP +++ + + + + ATL CGG L G+F PTV +D+ DM + +E+FGPV S+ + + D+ I AN T FGL + +T A + + AG V+I Sbjct: 207 TLTGSEPAGQSVAAIAG-DEIKPTVLELGGSDPFIVMPSADLDEAVKTAVTARVQNNGQSCIAAKRFIVHTDIYDTFVDKFVEQMKALKVGDPTDPATDVGPLATESGRDEIAKQVDDAVAAGATLRCGGKPLDGPGWFYPPTVVTDITKDMALYTEEVFGPVASMYRAADIDEAIEIANATTFGLGSNAWTNDAAEQQRFIDDIEAGQVFI 417
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAW (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=rocA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682 AGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ +G+ + GP I+ +QF+K+ YI G E LE GG ++GYFV+PT+ S +K I Q+EIFGPV +K + D+ I AN T +GL V T + + Sbjct: 224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453 The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bpback to top |