CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAT (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAS (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAR (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAN (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=rocA PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAM (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocA PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAE (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Newman) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAC (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAAB (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAA9 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
[Close]
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAA8 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=rocA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682
            AGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+        +G+   +    GP I+ +QF+K+  YI  G E    LE GG    ++GYFV+PT+ S +K    I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +
Sbjct:  224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ROCA_STAAT8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAS8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAR8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAN8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAM8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAE8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAC8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAB8.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA98.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA88.469e-3337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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