CX295024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAA3 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=rocA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682 AGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ +G+ + GP I+ +QF+K+ YI G E LE GG ++GYFV+PT+ S +K I Q+EIFGPV +K + D+ I AN T +GL V T + + Sbjct: 224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAA2 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=rocA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682 AGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ +G+ + GP I+ +QF+K+ YI G E LE GG ++GYFV+PT+ S +K I Q+EIFGPV +K + D+ I AN T +GL V T + + Sbjct: 224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAA1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=rocA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 87/232 (37.50%), Postives = 122/232 (52.59%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSAD 682 AGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ +G+ + GP I+ +QF+K+ YI G E LE GG ++GYFV+PT+ S +K I Q+EIFGPV +K + D+ I AN T +GL V T + + Sbjct: 224 AGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDN-TYMGPVINKKQFDKIKNYIEIGKEEGK-LEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNRE 453
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_ANOFW (1-pyrroline-5-carboxylate dehydrogenase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rocA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 83/230 (36.09%), Postives = 119/230 (51.74%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKS 676 AGLP GVLN + G G G L H +SFTG D G + E AAK + LK V E+GGK ++ +AD++ A + + F GQ C A SR E VYD+ + + + VG+P + GP ID + K++ YI G + L GG+ ++G+F+QPTVF+D+ I Q+EIFGPV + K K+ D + AN T +GL V + + Sbjct: 224 AGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDTIVVDKEADLELAAQSIVASAFGFSGQKCSACSRVVALEDVYDQVLNRVVELTKQLKVGNPEEQSTFMGPVIDQSAYNKIMEYIEIG-KQEGKLMTGGEGDDSKGFFIQPTVFADLDPKARIMQEEIFGPVVAFTKAKDFDHALEIANNTEYGLTGAVISNN 452
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_PSESP (Probable aldehyde dehydrogenase OS=Pseudomonas sp. GN=terPE PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32 Identity = 88/219 (40.18%), Postives = 122/219 (55.71%), Query Frame = 2 Query: 8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATL-ECGGDRLGNRGYFVQPTVFSDVKDDML-IAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAA 658 LP GV+NV++G G L H DV K+SFTG TG+ V AA ++LK +TLELGG ++ D+ D VE ++ F N GQ C A R Y+HE +Y+ F +K A A ++GD + GV GP + +QF KV+ I + + L ECG R G GYF+ P F D+ D+ +E FGP+ +LKF++ D+VI R N R G A Sbjct: 209 LPAGVINVLAG-NDDLGPWLTGHADVAKISFTGSSVTGRHVARSAA-ADLKRLTLELGGNDAAVVMADSLSDAVVERVFWSAFTNAGQICMATKRLYIHESIYEAFRDKLVAYAQNVVIGDGSQPGVTMGPLQNAKQFAKVMSLIDAVRQRGGRLIECGQMR-GGDGYFL-PITFVDLPDESAPEVVEEAFGPLLPLLKFRDVDEVIERVNAARTGWLA 423
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD_DEIRA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Deinococcus radiodurans GN=ssdA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32 Identity = 78/220 (35.45%), Postives = 109/220 (49.55%), Query Frame = 2 Query: 71 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 +H V +S TG G V ELA + +LK LELGG PFI+ D D+D V+ A N GQ C A R V + +YDEFV + + GDP GP + + ++ I+ AT+ GG R + G FVQPTV +DV DM +E+FGPV + + ++ D+ + AN + +GL VF+ D A + L G VWI Sbjct: 207 AHPAVQGVSLTGSERAGASVAELAGR-HLKKCVLELGGSDPFIVLDAEDLDTTVKAAATGRLSNTGQACIAAKRLMVVDDLYDEFVSRLGQTFSAFVPGDPADPSTRLGPLSSEQAARDLQAQVQDAIDKGATVVAGGQRPEHPGAFVQPTVLTDVTPDMRAYHEELFGPVAVVYRVRDEDEAVALANASTYGLGGAVFSSDLDRAQRVAERLDTGMVWI 425
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAS1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 88/248 (35.48%), Postives = 127/248 (51.21%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 AGLP GV+N V G G L + ++FTG TG + E AAK LK V E+GGK ++ D D D A E + F GQ C A SR VH+ VYDE +EKA A VG+ ++ GP I+ +QF+K+ YI G L+ GG GYFV+PT+ +++K I Q+EIFGPV +K K+ ++++ AN T +GL V T + + + + G +++ Sbjct: 224 AGLPKGVVNFVPGDPKEIGDYLVDSVHTHFVTFTGSRATGTRIFERAAKVQDGQQFLKRVIAEMGGKDAIVVDKDIDTDLAAESIVSSAFGFSGQKCSACSRAIVHKDVYDEVLEKAVALTKNLTVGNT-ENNTYMGPVINQKQFDKIKNYIEIG-SKEGKLKQGGGTDDATGYFVEPTIIANLKSSDQIMQEEIFGPVVGFVKGKDFEELLEIANDTDYGLTGAVITNNRENWIEAVESYDVGNLYL 469
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ROCA_STAHJ (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rocA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 85/248 (34.27%), Postives = 125/248 (50.40%), Query Frame = 2 Query: 2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 AGLP GV+N V G G L + ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH VYDE +EKA A VG+ + GP I+ +QF+K+ +YI G +E GG+ + GYF++PT+ S +K + Q+EIFGPV KF ++ I AN T +GL V T + + + G +++ Sbjct: 224 AGLPKGVVNFVPGDPKEIGDYLVDSVHTHFVTFTGSRATGTRIYERSAVVQEGQTFLKRVIAEMGGKDAIVVDENIDTDLAAESIITSAFGFSGQKCSACSRAIVHSSVYDEVLEKAVALTKELTVGNTVDNTF-MGPVINKKQFDKIKKYIEIG-GKEGKIEIGGEADDSTGYFIKPTIISGLKSSDQVMQEEIFGPVVGFTKFDNFEEAIEIANDTDYGLTGAVITNNRENWIKAVNEFDVGNLYL 469
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GABD1_MYCLE (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium leprae GN=gabD1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 78/212 (36.79%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 95 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 + TG G+ V +A + +KP LELGG PFI+ AD+D AV A N GQ C A R H +YDEFVEK AR VGDP + GP +V + + + + A + CGG R G+F PTV +D+ DM + DE+FGPV S+ DD I AN T FGL + +T++ + + AG V+I Sbjct: 206 TLTGSEPAGQAVGAIAG-NEIKPTVLELGGSDPFIVMPSADLDAAVATAVTGRVQNNGQSCIAAKRFIAHADIYDEFVEKFVARMETLRVGDPTDPDTDVGPLATESGRAQVEQQVDAAAAAGAVIRCGGKRPDRPGWFYPPTVITDITKDMALYTDEVFGPVASVYCATNIDDAIEIANATPFGLGSNAWTQNESEQRHFIDNIVAGQVFI 416
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: LADH_META3 (Lactaldehyde dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1030 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.070e-31 Identity = 76/241 (31.54%), Postives = 123/241 (51.04%), Query Frame = 2 Query: 8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730 +P GV N+++G G G + + ++KLSFTG + G + + K+ K +TLELGG +P II DA++++AVE F N GQ C + R + + V DEF+ K + + +G+P I + E+V + I I L CGG R + PT+ ++ D ++A EIF PV I++ + ++ + +AN + +GL +GVFT+ + A L G V I Sbjct: 188 IPLGVFNLLTGEGHIVGDEIVKNNKINKLSFTGSVEVG---ESITKKAGFKKITLELGGNNPMIILKDANINKAVESCMSGKFLNSGQVCISVGRVLIEQEVADEFINKIVEKVKKLKIGNPLDEDTNISSLISLDSAERVEKLINKSIGQGGKLICGGKR---ENSIIYPTIL-EITADNILANIEIFAPVLPIIRVNDMNEALNQANNSNYGLHSGVFTQDINKALYFADNLEYGGVLI 421 The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bpback to top |