CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA_BACSU (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis GN=iolA PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30
Identity = 82/244 (33.61%), Postives = 126/244 (51.64%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG-DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G        L  H ++  +SF G    G+ V +  ++ NLK V    G K+  I+ +DA+++  V     A F + G+ C A +   V E + DEF+ K + +     +G+    GV  GP I  +  ++ L YI  G+E  A L C G + + + GYFV PT+F +V  +M I +DEIF PV S+++ K   + I  ANK+ F   A +FT +++        + AG + I
Sbjct:  195 AGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGI 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDHX_YEAST (Aldehyde dehydrogenase 1, mitochondrial OS=Saccharomyces cerevisiae GN=ALD1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30
Identity = 78/210 (37.14%), Postives = 113/210 (53.81%), Query Frame = 2
Query:   35 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGV 664
            SGYGP+A     SH   D L++TG    G++V +LA +  +K VTLE GGKS   +F   DV  AVE   F +F  QGQCC A S   VH     + VE    +    ++    +S + +GP I    FE + R I S    N+ + CGG R      ++ PT+ + + D+  I ++E+F P+ +IL  K  D+ I+R N ++FGLAA V
Sbjct:  243 SGYGPSAKIPCLSHKPNDILAYTGSTLVGRVVSKLAPEQVMKKVTLESGGKSTMAVFIQHDVTWAVENTQFGVFDRQGQCCIAQSGYTVHRSTLSQIVENNLEKDPSYVLHVDTESDI-RGPFILKIHFESIPRRINSAKAENSKVLCGGPR--ENSVYLYPTLSATLTDECRIMKEEVFAPIITILCVKTVDEAIQRGNNSKFGLAAYV 449          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA3_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Geobacillus kaustophilus GN=iolA3 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 86/246 (34.96%), Postives = 120/246 (48.78%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDR---LGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLPPGVLN+V G     G  L  H D+  +SF G     + V + AA    K V    G K+  I+  DAD+D AV     A F + G+ C A S       + DE V + K  A R  +G+    GV  GP I     E+ ++YI  G +  A L   G R      +GYF+ PT+F  VK  M I  DEIF PV S+++ ++ D+ I  AN++ F   A ++T SA         + AG + +
Sbjct:  195 AGLPPGVLNIVHGAHEVVGGIL-EHKDIKAVSFVGSQPVAEYVYKTAAAHG-KRVQALAGAKNHSIVMPDADLDMAVTNIINAAFGSAGERCMACSVVVAVGDIADELVRRLKEAADRIQIGNGLDKGVFLGPVIRESHKERTIKYIEIGEKEGALLVRDGRRDSATSGQGYFIGPTIFDHVKPGMTIWTDEIFAPVLSVVRARDLDEAIEIANRSEFANGACIYTDSAKAIRQFREEIDAGMLGV 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA2_BACWK (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 88/246 (35.77%), Postives = 124/246 (50.41%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GVLN+V G        L +  DV  +SF G     + + + AA +N K V    G K+  I+  DAD+   V+    A F + G+ C A +   V E V DE V +    A    +G+  + GV  GP I     E+ L YI+SG+E  ATL   G   D   ++GYFV PT+F +V  +M I QDEIF PV SI++ K+  + I  AN + F   A ++T SA         + AG + +
Sbjct:  195 AGLPDGVLNIVHGAHDVVNGILDNE-DVKAVSFVGSQPVAEYIYKTAA-ANGKRVQALAGAKNHSIVLKDADLSSTVKEITSAAFGSAGERCMAAAVVVVEEDVADELVNRLLQEANAITIGNGLEEGVFLGPVIREGHKERTLGYIQSGVEQGATLIRDGREDDIANSQGYFVGPTIFDNVTQEMKIWQDEIFAPVLSIVRVKDLMEAIHVANASPFANGACLYTNSAKAIREFREEIDAGMLGV 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA_LISIN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria innocua GN=iolA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29
Identity = 81/244 (33.20%), Postives = 121/244 (49.59%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G        L +   +  +SF G    G+ V +  + +NLK V    G K+  I+ +DAD++  V     A F + G+ C A +   V E + D+F+   +  A    +G+    GV  GP I  E  ++ + YI  G+E  A L   G   G + GYFV PT+  DV  DM I +DEIF PV S+++ K   + +R AN++ F   A +FT +A         + AG + +
Sbjct:  195 AGLPKGVFNVVYGAHDVVNGILENET-IKAVSFVGSKPVGEYVYKTGS-ANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAAFGSAGERCMACAVVTVEEGIADDFLAALRTAAQNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGVEEGAKLTVDGRETGLSEGYFVGPTILEDVTTDMTIWKDEIFAPVLSVIRVKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGV 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: LADH_METM5 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0090 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.953e-29
Identity = 69/241 (28.63%), Postives = 129/241 (53.53%), Query Frame = 2
Query:    8 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            +P G+ N+ +G G   G  ++ + +++ +SFTG  + G   + ++  + +K V LELGG +P I+  D+D+  A + A  + F N GQ C +  +  V E V + F +       + I+G+P  +  + GP I PE   ++   I+  +     +  GG+R   +   + P V  ++ ++ ++++ E FGPV  ILK K++++ +  AN +++GL AGVFT   + A  +  +L  G + I
Sbjct:  188 VPRGIFNLATGNGDIVGDEISKNDNINMVSFTGSVEVG---ESISKNAKMKKVALELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVLETFTKHVIEETKKLILGNPLDTKTDIGPLISPESALRIENLIKKSVNEGGEVLIGGNR---QNSLISPAVI-NIDENNILSKIETFGPVLPILKVKDSEEAVSIANNSKYGLQAGVFTNDINKAMKIADSLEYGGIMI 421          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA_LISMF (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes serotype 4b (strain F2365) GN=iolA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.953e-29
Identity = 81/244 (33.20%), Postives = 122/244 (50.00%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G        L + + +  +SF G    G+ V +  + +NLK V    G K+  I+ +DAD++  V     A F + G+ C A +   V E + DEF+   +  A    +G+    GV  GP I  E  ++ + YI  G+E  A L   G   G + G+FV PT+  DV  DM I +DEIF PV S+++ K   + +R AN++ F   A +FT +A         + AG + +
Sbjct:  195 AGLPKGVFNVVYGAHDVVNGILENEI-IKAVSFVGSKPVGEYVYKTGS-ANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAAFGSAGERCMACAVVTVEEGIADEFLAALRTAAQNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGLEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIRVKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGV 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA_LISMC (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=iolA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.953e-29
Identity = 81/244 (33.20%), Postives = 122/244 (50.00%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G        L + + +  +SF G    G+ V +  + +NLK V    G K+  I+ +DAD++  V     A F + G+ C A +   V E + DEF+   +  A    +G+    GV  GP I  E  ++ + YI  G+E  A L   G   G + G+FV PT+  DV  DM I +DEIF PV S+++ K   + +R AN++ F   A +FT +A         + AG + +
Sbjct:  195 AGLPKGVFNVVYGAHDVVNGILENEI-IKAVSFVGSKPVGEYVYKTGS-ANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAAFGSAGERCMACAVVTVEEGIADEFLAALRTAAQNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGLEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIRVKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGV 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA_BACNA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis subsp. natto GN=iolA PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.330e-29
Identity = 81/244 (33.20%), Postives = 126/244 (51.64%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG-DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G        L  H ++  +SF G    G+ V +  ++ +LK V    G K+  I+ +DA+++  V     A F + G+ C A +   V E + DEF+ K + +     +G+    GV  GP I  +  ++ L YI  G+E  A L C G + + + GYFV PT+F +V  +M I +DEIF PV S+++ K   + I  ANK+ F   A +FT +++        + AG + I
Sbjct:  195 AGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYKKGSE-HLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGI 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: IOLA_LACCA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Lactobacillus casei GN=iolA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29
Identity = 84/245 (34.29%), Postives = 124/245 (50.61%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNR--GYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GVLN+V+G        L  H D+  +SF G    G+ V +  +  +LK V    G K+  I+  DAD+D AV+    + F + G+ C A S   + + + D+F+ K    A    +G+    GV  GP I  E  E+ L YI++G++  A L   G     +  GYFV PT+F DVK DM I  DE+F PV S+++ K+    +  AN +     A +FT SA +       + AG + I
Sbjct:  199 AGLPDGVLNIVNGAVDVVNGIL-DHPDIKAISFVGSERVGEYVYKRGS-DHLKRVQALTGAKNHTIVLADADLDAAVKGIISSSFGSAGERCMATSVLVLQDEIADKFMAKFTQAAKDIKIGNGLDKGVFLGPVIRKENQERTLNYIQTGVKEGAKLVLDGSAEAKKHDGYFVGPTIFEDVKTDMTIWHDEMFAPVLSVIRAKDLPQAVAIANTSELANGACLFTDSAASIRYFRENIDAGMLGI 441          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IOLA_BACSU8.764e-3033.61Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALDHX_YEAST8.764e-3037.14Aldehyde dehydrogenase 1, mitochondrial OS=Sacchar... [more]
IOLA3_GEOKA1.145e-2934.96Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACWK1.145e-2935.77Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_LISIN1.495e-2933.20Methylmalonate semialdehyde dehydrogenase [acylati... [more]
LADH_METM51.953e-2928.63Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]
IOLA_LISMF1.953e-2933.20Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_LISMC1.953e-2933.20Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACNA3.330e-2933.20Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_LACCA4.350e-2934.29Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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