CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURVG (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=astD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.091e-23
Identity = 80/247 (32.39%), Postives = 115/247 (46.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I    D+D AV     + F + GQ C    R +V +  + E           +I  D F +  +   G  I      K++    R I  G      +     RLG    FV  ++  DV D   +  +E FGP+  I+++   D+ I RAN T FGL+AG+ +  A       R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGAVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAHGERFLARLVDVTSKITADVFDADPQPFMGAVISARAAAKLVDAQARLIEQGARPIIEMTQRDARLG----FVNASII-DVTDVARLPDEEHFGPLAQIVRYARFDEAIERANDTAFGLSAGLLSDDAHAWEQFRRTIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURM1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=astD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.658e-23
Identity = 78/247 (31.58%), Postives = 117/247 (47.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I +  D+D AV     + F + GQ C    R +V +  + +           +I  D F +  +   G  I      K++    R I  G +    ++    RLG    FV   +  DV +   +  +E FGP+  I+++ + D+ I RAN T FGL+AG+    A       R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGDRFLARFVDVTSKITADVFDADPQPFMGAVISARAAAKLVDAQSRLIEQGAQPIIAMKQRDPRLG----FVNAAIV-DVTNVANLPDEEHFGPLAQIVRYADFDEAIARANDTAFGLSAGLLADDARAWEHFRRTIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURCM (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=astD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.658e-23
Identity = 80/247 (32.39%), Postives = 115/247 (46.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++           + LE+GG +P +I +  D+D AV     + F + GQ C    R +V +  + E      A    +I  D F +  +   G  I      K++    R I  G +    +     RLG    FV  ++  DV     +  +E FGP+  I+++   D+ I RAN T FGL+AG+    A       R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVIGEVEDLDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGERFLARLADVTSKITADVFDADPQPFMGAVISARAAAKLVDAQSRLIEQGAKPIIEMTQRDPRLG----FVNASII-DVTGVANLPDEEHFGPLAQIVRYATFDEAIERANDTAFGLSAGLLADDAHAWEHFRRTIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURA4 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=astD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.658e-23
Identity = 79/247 (31.98%), Postives = 117/247 (47.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I +  D+D AV     + F + GQ C    R +V +  + E      A    +I+ D F +  +   G  I      K++    R +  G +    +     RLG    FV  ++  DV     +  +E FGP+  I+++   D+ I RAN T FGL+AG+    A       R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDLDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGERFLARFADVTSKIMADVFDADPQPFMGAVISARAAAKLVDAQSRLVEQGAKPIIEMTQRDPRLG----FVNASII-DVTGVANLPDEEHFGPLAQIVRYATFDEAIERANDTAFGLSAGLLADDAHAWEHFRRTIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL7A1_CAEEL (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.658e-23
Identity = 73/222 (32.88%), Postives = 110/222 (49.55%), Query Frame = 2
Query:   14 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE---KAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFT 670
            P + ++V G G   G AL     V+ +SFTG  + GKIV +   ++    + LELGG +  I+ +DAD++  V    FA     GQ C    R  VH++VYD+ +E   KA A+   RI G P  S    GP  + +   K    +   + S   +E GG  L   G FV PT+ + +K D  +   E F P+  +LKF   ++ I   N+   GL++ +FT
Sbjct:  235 PALCSLVCGEGDV-GQALVKDKRVNLVSFTGSSEIGKIVGQ-QVQARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRLIVHDKVYDQVLERLKKAYAQFESRI-GCPLDSNTIIGPLHNQQAVGKYKASVAEAVASGGKIEYGGKVLERDGNFVLPTIVTGLKHDSPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSLFT 453          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURTA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=astD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 80/248 (32.26%), Postives = 119/248 (47.98%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P ++ +  D+D AV  A  + F + GQ C    R  V    + D FV +  A    +I    F +  +   G  I      +++    R +  G      ++     LG    FV   +  DV +   +  +E FGP+  I+++ + DD I RAN T FGL+AG+        +T  RA+RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVVAEVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFVARL-ADVASKITASVFDADPQPFMGAVISARAASRLVAAQARLVGLGASPIIEMKQRDPALG----FVNAAIL-DVTNVRELPDEEHFGPLAQIVRYTDLDDAIARANDTAFGLSAGLLADDEQAWHTFRRAIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: YOSF_SCHPO (Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe GN=SPBC21C3.15c PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23
Identity = 67/230 (29.13%), Postives = 105/230 (45.65%), Query Frame = 2
Query:   47 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            P     L SH  +  ++F G     K+V   AAK  L P+ LELGGK P I+ DD  +++ + +    +F + GQ C    R    + VYD  + K   R     +G   ++ V+ G  +   +F+ +   I+  +   A L  GG R  +    +G +  PT+  D  ++M IAQ+E F P+  + + K  +  +  AN T FGL A VF +           L  G V
Sbjct:  198 PDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQ-LTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMV 426          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_NOVAD (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=astD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23
Identity = 74/242 (30.58%), Postives = 111/242 (45.87%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE-QGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AG+P  V+ V+ G GP  G AL +H  +D + FTG    G  +    A +  K V LE+GG +P +++D   ++ A  L   + F + GQ C A  R  +   ++DE ++  K  A R IVG PF       GP ID    + +       + S         RL     F+ P +  DV         E+FGP+  +++  + D+ I  AN TRFGL+A +        N     +RAG V
Sbjct:  174 AGIPAAVVQVLIG-GPEEGQALVAHDGIDGVLFTGSAHAGIAINRKLASNPGKIVALEMGGNNPIVVWDTPKIEDAATLIVQSAFTSAGQRCTAARRLIIKASMFDEVIDHVKRLADRIIVGAPFDDPAPFMGPVIDNRTADGLTESFVYLLSSGGRPIKHMVRLQEDRPFLSPAII-DVTAVADRPDVELFGPLLQVVRVDDFDEAIAEANNTRFGLSASLIGGDPQDYNRFWANIRAGVV 413          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 78/247 (31.58%), Postives = 115/247 (46.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGI----ESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P G+++ V+G G   G  L  H  V+ +SFTG  DTG  + +   K+ + P+ +ELGGK   I+ +DAD+D          F   GQ C A     + E + D  V+K  A+  +  VG P     E    I P   E    +I   +    E  AT      R GN    + P +   V+ DM IA +E FGPV  +++    ++ I   N + FGL   +FT+  + A  +  A+  GTV I
Sbjct:  213 AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISK---KAGMVPLQMELGGKDACIVLEDADLDLVSANIVKGGFSYSGQRCTAVKVVLIMESIADAVVQKVNAKLAKLKVGPP-----EDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGN---LIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCIFTRDINKAILISDAMETGTVQI 447          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURCH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=astD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 77/247 (31.17%), Postives = 115/247 (46.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I +  D+D AV     + F + GQ C    R +V +  + +      A    +I  D F +  +   G  I      K++    R +  G +    +     RLG    FV   +  DV     +  +E FGP+  ++++   D+ I RAN T FGL+AG+    A       R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGDRFLARFADVTSKITADVFDADPQPFMGAVISARAAAKLVDAQARLVEQGAKPIVAMAQRDPRLG----FVNAAIV-DVTGVANLPDEEHFGPLAQVVRYATFDEAIERANDTAFGLSAGLLADDAKVWEHFRRTIRAGIV 428          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASTD_BURVG2.091e-2332.39N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURM14.658e-2331.58N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURCM4.658e-2332.39N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURA44.658e-2331.98N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
AL7A1_CAEEL4.658e-2332.88Putative aldehyde dehydrogenase family 7 member A1... [more]
ASTD_BURTA6.084e-2332.26N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
YOSF_SCHPO7.946e-2329.13Putative aldehyde dehydrogenase-like protein C21C3... [more]
ASTD_NOVAD7.946e-2330.58N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
GAPN_MAIZE1.038e-2231.58NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ASTD_BURCH1.038e-2231.17N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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