CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURCA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=astD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 77/247 (31.17%), Postives = 115/247 (46.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I +  D+D AV     + F + GQ C    R +V +  + +      A    +I  D F +  +   G  I      K++    R +  G +    +     RLG    FV   +  DV     +  +E FGP+  ++++   D+ I RAN T FGL+AG+    A       R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGDRFLARFADVTSKITADVFDADPQPFMGAVISARAAAKLVDAQARLVEQGAKPIVAMAQRDPRLG----FVNAAIV-DVTGVANLPDEEHFGPLAQVVRYATFDEAIERANDTAFGLSAGLLADDAKVWEHFRRTIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SHEPA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=astD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 76/245 (31.02%), Postives = 124/245 (50.61%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVLRYIRS--GIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALA+H  +D L FTG   TG I+ +  A    K + LE+GG +P II D AD   AV     + + + GQ C    R YV +    + + +    A+++I   P+ +  +   G  I     + ++   R+   +  NA +E     +G     V P +  DV   + +  +E FGP+  ++++ + D+ I+ AN TR+GL+AG+   S +  +  +  +RAG V
Sbjct:  187 AGLPKGVINLVQGEVET-GKALAAHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKDVADTKAAVHDIIQSAYISAGQRCTCARRLYVEKGAAGDALLEQLVAAVKQIQVGPWNAQPQPFMGSMISETAAKGMVEAQRNLVNLGGNALVELTHLEVGTG--LVSPGLI-DVTGVIELPDEEYFGPLLQVVRYSDFDEAIKLANATRYGLSAGILADSREDYDYFLARIRAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_PSEA6 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=astD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22
Identity = 78/248 (31.45%), Postives = 113/248 (45.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI-VGD------PFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H D+D L FTG   TGKI+ E  A    K + LE+GG +P I+ D +D+D  V     + F   GQ C    + ++      + +        + I VGD      PF      G  I       ++   +  ++  AT       L     FV P +         +  DE FGP+  +++F + D  I   N T+FGL+AG+ + S D      + +RAG V
Sbjct:  190 AGLPKGVLNLVQGEVET-GKALAAHPDLDGLFFTGSSRTGKILHEQYAGHPGKILALEMGGNNPLIVKDISDIDATVHDIIQSAFVTSGQRCTCARKLFLENNTQGDAILARLIEVTKNIKVGDYDADEQPF-----MGAMISKNAAHAMVMAQQQLLDLGATSLVELTHLDPESGFVSPGIIDVTAMVEQMPDDEHFGPLLKVVRFDDFDRAISLGNNTKFGLSAGLLSDSEDLYQHFYQRIRAGIV 431          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SHEWM (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=astD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 80/248 (32.26%), Postives = 117/248 (47.18%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSG-IESNAT-LECGGDRLGNRGYFVQPT-----VFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALASH  +D L FTG   TG I+ +  A    K + LE+GG +P II    D   AV     + + + GQ C    R YV +    + +    A A++RI    + S      Q  P     +      G +ES    L  GG  L    +  + T        DV   + +  +E FGP+  ++++ + D+ I+ ANKTR+GL+AG+   S D     +  +RAG V
Sbjct:  187 AGLPAGVINLVQGEVET-GKALASHEQIDGLFFTGSSRTGHILHQQYAGEPGKILALEMGGNNPLIIKGVKDTKAAVHDIIQSAYISSGQRCTCARRLYVEKGAEGDALLAELADAVKRIQVGAWNS------QPQPFMGSMISETAAKGMVESQRNLLNLGGSSLVELTHLKEGTGLVSPGLIDVTQVIELPDEEYFGPLLQVVRYTDFDEAIKLANKTRYGLSAGILADSRDDYEYFLARIRAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SHEHH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=astD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 75/245 (30.61%), Postives = 124/245 (50.61%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVLRYIRS--GIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALA+H  +D L FTG   TG I+ +  A    K + LE+GG +P II D AD   AV     + + + GQ C    R YV +    + + +    A+++I   P+ +  +   G  I     + ++   R+   + +N+ +E      G     V P +  DV   + +  +E FGP+  ++++ + D+ I+ AN TR+GL+AG+   S +  +  +  +RAG V
Sbjct:  187 AGLPAGVINLVQGEVET-GKALAAHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKDVADTKAAVHDIIQSAYISAGQRCTCARRLYVEKGATGDALLEQLVAAIKQIKVGPWNAQPQPFMGSMISETAAKGMVEAQRNLLNLGANSLVELTHIEAGTG--LVSPGLI-DVTGVIELPDEEYFGPLLQVVRYSDFDEAIKLANTTRYGLSAGILADSREDYDYFLARIRAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_IDILO (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Idiomarina loihiensis GN=astD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 76/251 (30.28%), Postives = 118/251 (47.01%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIE----SNATLECGGDRL------GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AG+P GVLN+V G   T G AL++H  +D L FTG  +TG ++ +       K + LE+GG +P ++ + ADVD AV     + F   GQ C    R ++ +      V +        I+ D +++        DP+ F   +   ++  E     N  L  G   L       ++  FV P +  DV     +  +E FGP+  + +FK+ D  I+ AN TR+GL+AGV      T     + +RAG V
Sbjct:  190 AGIPAGVLNLVQGEVDT-GKALSAHPQIDGLYFTGSSNTGHLLHKQFGGRPDKILALEMGGNNPLLVTNVADVDAAVHNIVQSAFITSGQRCTCARRLFIEDSEQGRAVLERLIEVTENILVDDYEA--------DPQPFMGAMISAKAAGEMVDAQNELLHKGAKSLVRMKQTDSKKGFVTPGIV-DVTGVEDLPDEEHFGPLLKVYRFKDIDAAIKEANNTRYGLSAGVLCDDEQTYRYFFKHIRAGIV 430          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_BURCC (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=astD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 78/247 (31.58%), Postives = 114/247 (46.15%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE--QGPQIDPEQFEKVL----RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALA+H  +D L FTG  DTG ++ +         + LE+GG +P +I +  D+D AV     + F + GQ C    R +V +  + +           +I  D F +  +   G  I      K++    R I  G +    +     RLG    FV   +  DV     +  +E FGP+  I+++   DD I RAN T FGL+AG+     +      R +RAG V
Sbjct:  188 AGLPAGVLNLVQGEKDT-GIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDIDAAVHHTIQSAFLSAGQRCTCARRIFVPQGAFGDRFLARFVDVTSKITADVFDADPQPFMGAVISARAAAKLVDAQSRLIEQGAKPIIAMTQRDPRLG----FVNAAIV-DVTGVANLPDEEHFGPLAQIVRYATFDDAIERANDTAFGLSAGLLADDENAWAHFRRTIRAGIV 428          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_ENT38 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Enterobacter sp. (strain 638) GN=astD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 76/245 (31.02%), Postives = 114/245 (46.53%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ--GPQIDPEQFEKVLRYIRSGIESNA--TLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLPPGVLN+V G G   G AL++  D+D L FTG   TG  +    A    K + LE+GG +P I+ D  D+D AV LA  + F   GQ C    R  V      +           R+V D + +  +   G  I  +    V+   R  +   A   LE    +L   G  +      D+ D   I  +E+FGP+  + ++ + D  I  AN TR+GL++G+ +   +  + ++   RAG V
Sbjct:  187 AGLPPGVLNLVQG-GRETGQALSALSDLDGLLFTGSAGTGYQLHRQLAGQPEKILALEMGGNNPLIVEDPEDIDAAVHLAIQSAFVTAGQRCTCARRLLVKNGAQGDAFLARLIEVTARLVPDAWDAEPQPFIGGLISEQAANNVIHAWREHVARGAKTLLE---PKLVQPGTSLLTPGIIDMSDARDIPDEEVFGPLLCVWRYDDFDSAIAMANNTRYGLSSGLISPDREKFDQLLIEARAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: MMSA_MOUSE (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22
Identity = 74/250 (29.60%), Postives = 120/250 (48.00%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV---HERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            +G P G LN++ G        +  H D+  +SF G    G+ + E  ++ N K V   +G K+  ++  DA+ +  +     A F   GQ C A S   +    ++   E V++AK   +R   GD  + G + GP I P+  E+V   I SG +  A++   G R+  +GY    FV PT+ S+VK  M   ++EIFGPV  +L+ +  D+ I+  N   +G    +FT +  TA      +  G V +
Sbjct:  228 SGAPDGTLNIIHGQHDAVNF-ICDHPDIKAISFVGSNQAGEYIFERGSR-NGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELVDRAKN--LRVNAGD--QPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGATARKYAHMVDVGQVGV 471          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: MMSA_ARATH (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21
Identity = 78/250 (31.20%), Postives = 117/250 (46.80%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV---HERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GVLN+V G   T  A +    D+  +SF G    G  +   AA    K +   +G K+  ++  DA++D  +     A F   GQ C A S        +   D+ VE+AKA  ++   G   +   + GP I  +  E++ R I+SG++  A L   G  +   GY    F+ PT+ S V  DM   ++EIFGPV   ++    D+ I   NK ++G  A +FT S   A      + AG + I
Sbjct:  302 AGLPDGVLNIVHGTNDTVNA-ICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKA--LKVTCGS--EPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGI 545          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASTD_BURCA1.038e-2231.17N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHEPA1.355e-2231.02N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_PSEA61.770e-2231.45N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHEWM3.019e-2232.26N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHEHH3.019e-2230.61N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_IDILO3.019e-2230.28N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURCC3.019e-2231.58N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_ENT386.726e-2231.02N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
MMSA_MOUSE8.785e-2229.60Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
MMSA_ARATH1.147e-2131.20Methylmalonate-semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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