CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL3A1_MOUSE (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21
Identity = 68/213 (31.92%), Postives = 102/213 (47.89%), Query Frame = 2
Query:   86 DKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            D + +TG    GKIV   AAK +L PVTLELGGKSP  +  D D+D A     +  F N GQ C A         + +E VEK K ++++   G+  K   + G  I+   F++V+  I S   ++      G        ++ PT+  DV     + Q+EIFGPV  I+  +  D+ I+  N+    LA  VF+ +      M+    +G V
Sbjct:  182 DHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNEIVEKLK-KSLKDFYGEDAKQSHDYGRIINDRHFQRVINLIDSKKVAH------GGTWDQPSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLDEAIKFINQREKPLALYVFSNNDKVIKKMIAETSSGGV 386          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_VIBSL (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=astD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21
Identity = 75/248 (30.24%), Postives = 118/248 (47.58%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYVHE-RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG-----DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALA    +D + FTG  +TG I+    A    K + LE+GG +P +I D   D D  V     + F + GQ C    R YV      D+ ++K  A  ++  V  PF    E  P + P+  E   ++I   +++ A L+  G     +       FV P +  D  +   +  +E FGP+  +++++  +  +  AN TRFGL+AG+ +         +  +RAG V
Sbjct:  187 AGLPAGVINLVQGAKET-GIALADAKGLDGVLFTGSANTGHILHRQFAGQPGKMLALEMGGNNPMVISDQFGDADATVYTIIQSAFISAGQRCTCARRLYVPVGEKGDQLLDKLVAATLKIRVDQPF---AEPAPFMGPQISEAAAKFI---LDAQANLQSLGGVSLVEAKAGEAAFVSPGII-DATNIAELPDEEYFGPLLQVVRYQSLEQAVELANDTRFGLSAGLVSTDDSEWEYFVDHIRAGIV 426          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SERP5 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=astD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21
Identity = 77/248 (31.05%), Postives = 115/248 (46.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE-RVYDEFVEKAKARAMRRIVG------DPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G G   G ALA+  D+D L FTG   TG  +    A    K + LE+GG +  I+    D D AV LA  + F + GQ C    R  V      D F+E+    A    +G       PF  GV     I     EK+L      +           RL +    + P +  DV     +  +E FGP+ +I+++ + D+ +R AN+TR+GL+ G+ +   +  + ++   RAG V
Sbjct:  190 AGLPDGVINMVQG-GRETGEALAASTDIDGLLFTGSAGTGYHLHRQLAGQPEKILALEMGGNNALIVDQIEDCDAAVNLAIQSAFISAGQRCTCSRRILVKRGSEGDAFIERLVQVASALRIGRWDAEPQPFMGGV-----ISSAAAEKMLAAQHHLLSLGGKALLTMQRLESGSALLSPGII-DVTGVRDVPDEEYFGPLTTIIRYNDFDEAVRIANQTRYGLSVGLVSPQRERFDHLLLEARAGIV 430          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_ECO27 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=astD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21
Identity = 78/250 (31.20%), Postives = 121/250 (48.40%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVG------DPFKSGV--EQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLPPGVLN+V G G   G AL++  D+D L FTG  +TG  +    +    K + LE+GG +P II + AD+D AV L   + F   GQ C    R ++      D F+ +  A + R   G       PF  G+  EQ  Q     ++++       + +   L+ G   L      ++ T  + V D      +E+FGP+  + ++   D+ IR AN TRFGL+ G+ +   +  + ++   RAG V
Sbjct:  187 AGLPPGVLNLVQG-GRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLFLKSGTQGDAFLARLVAVSQRLTPGTWDDEPQPFIGGLISEQAAQQVVTAWQELEAMGGRTLLAPRLLQAGTSLL--TPGIIEMTGVTGVPD------EEVFGPLLRVWRYDNFDEAIRMANNTRFGLSCGLVSPEREKFDQLLLEARAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SHESH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=astD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21
Identity = 77/248 (31.05%), Postives = 116/248 (46.77%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSG-IESNATL-ECGGDRLGNRGYFVQPT-----VFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALASH  +D L FTG   TG I+ +  A    K + LE+GG +P II    D   AV     + + + GQ C    R YV +    + +      A++RIV   + +      Q  P     +      G +E+   L   GG  L    +  + T        DV   + +  +E FGP+  ++++ + D+ I+ AN TR+GL+AG+   S D     +  +RAG V
Sbjct:  187 AGLPAGVINLVQGEVET-GKALASHPQIDGLFFTGSSRTGHILHQQYAGEPGKILALEMGGNNPLIIKGVKDSKAAVHDIIQSAYISSGQRCTCARRLYVEKGAEGDALLAQLTDAVKRIVVGAWNA------QPQPFMGAMISETAAKGMVEAQRNLVNLGGHSLVELTHIEEGTGLVSPGLIDVSQVIELPDEEYFGPLLQVVRYTDFDEAIKLANNTRYGLSAGILADSRDDYEYFLARIRAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_MARAV (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=astD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21
Identity = 75/248 (30.24%), Postives = 118/248 (47.58%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE-RVYDEFVEKAKARAMRRIVGD------PFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G G   G  LA H  +D L FTG    G ++ E       K + LE+GG +P I+ + +D+D AV  A  + F + GQ C    R  V + +  DEF+ +    A R  V +      PF      G  I  E   ++L+   + +E  AT      +L      + P +       + +   E FGP+ ++ ++K  D+ +  AN TR+GL+AG+ +      N ++  +RAG V
Sbjct:  192 AGLPDGVINLVQG-GSDTGKCLARHSLIDGLFFTGSSTVGHLLHEQFGGQPEKILALEMGGNNPLIVQNVSDLDGAVHHALQSAFLSAGQRCTCARRLLVPKGKKGDEFLARLVEVAARITVAEFDADPQPF-----MGSVISAEAANQLLKAQAAMLEKGATSLLEMKQLKPDTGLLSPGIVD--ATGIELEDQEFFGPLLTVYRYKGFDEALELANNTRYGLSAGILSDDRKLYNRLVEEVRAGIV 431          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD1_CAUCR (N-succinylglutamate 5-semialdehyde dehydrogenase 1 OS=Caulobacter crescentus GN=astD1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21
Identity = 76/244 (31.15%), Postives = 113/244 (46.31%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAM-RRIVGDPFKSGVE-QGPQIDPEQFEKVL-RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP  VL +V G G  AG AL  H  +D + FTG    G+ +    A +  K + LELGG +P +++D AD++ A  L   + +   GQ C    R  + E    + + +A    M R ++G PF+S     GP ID     +VL    R   +    L     R   R   + P +      D  +  +EIFGP+  + +  + D  +  AN TRFGLAAG+ +           ++RAG V
Sbjct:  176 AGLPDHVLTIVIG-GGEAGEALVRHEALDGVLFTGGVQAGRAIHRALADAPHKILALELGGNAPLVVWDVADIEAAAHLIVQSAYVTAGQRCTCARRLILPEGARGDALLEALTMLMDRLVIGGPFQSPAPFMGPVIDAHAAAQVLAAQDRMTADGGRPLRLAAVREA-RSALLSPGLIE--LTDAPLRDEEIFGPLLQVRRAADFDAALALANATRFGLAAGLISDDEALYRRFWTSVRAGIV 415          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SHESA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=astD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21
Identity = 77/249 (30.92%), Postives = 119/249 (47.79%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSG-IESNATLE-CGGDRLGNRGY------FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALASH  +D L FTG   TG ++ +  A    K + LE+GG +P II   AD+  AV     + + + GQ C    R YV +    + +      A+++I   P+ +      Q  P     +      G + + A L+  GG  L    +       V P +  DV     +  +E FGP+  ++++ + D  I+ AN+TR+GL+AG+   S D     +  +RAG V
Sbjct:  187 AGLPAGVINLVQGEVDT-GKALASHPQLDGLFFTGSSRTGHLLHQQYAGHPGKILALEMGGNNPLIIKGVADIKAAVHDILQSAYISSGQRCTCARRLYVEQGEQGDALVAKLVEAVKQIKVGPWNA------QPQPFMGSMISEAAAKGMVAAQANLQNLGGVSLVELSHLQAGTGLVSPGLI-DVTAVGELPDEEYFGPLLQLVRYSDFDQAIKLANQTRYGLSAGILADSRDDYEYFLARIRAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_ECOUT (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=astD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.269e-20
Identity = 75/248 (30.24%), Postives = 119/248 (47.98%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVG------DPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLPPGVLN+V G G   G AL++  D+D L FTG  +TG  +    +    K + LE+GG +P II + AD+D AV L   + F   GQ C    R ++      D F+ +  A + R   G       PF  G+     I  +  ++V+   +  +E+         RL   G  +      ++     +  +E+FGP+  + ++   D+ IR AN TRFGL+ G+ +   +  + ++   RAG V
Sbjct:  187 AGLPPGVLNLVQG-GRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLFLKSGTQGDAFLARLVAVSQRLTPGTWDDEPQPFIGGL-----ISEQAAQQVVTAWQE-LEAMGGRTLLAPRLLQAGTSLLTPGIIEMTGVTGLPDEEVFGPLLRVWRYDNFDEAIRMANNTRFGLSCGLVSPEREKFDQLLLEARAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_ECOL5 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=astD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.269e-20
Identity = 75/248 (30.24%), Postives = 119/248 (47.98%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVG------DPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLPPGVLN+V G G   G AL++  D+D L FTG  +TG  +    +    K + LE+GG +P II + AD+D AV L   + F   GQ C    R ++      D F+ +  A + R   G       PF  G+     I  +  ++V+   +  +E+         RL   G  +      ++     +  +E+FGP+  + ++   D+ IR AN TRFGL+ G+ +   +  + ++   RAG V
Sbjct:  187 AGLPPGVLNLVQG-GRATGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLFLKSGTQGDAFLARLVAVSQRLTPGTWDDEPQPFIGGL-----ISEQAAQQVVTAWQE-LEAMGGRTLLAPRLLQAGTSLLTPGIIEMTGVTGLPDEEVFGPLLRVWRYDTFDEAIRMANNTRFGLSCGLVSPEREKFDQLLLEARAGIV 427          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL3A1_MOUSE4.360e-2131.92Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
ASTD_VIBSL5.694e-2130.24N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SERP55.694e-2131.05N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_ECO275.694e-2131.20N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHESH7.437e-2131.05N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_MARAV7.437e-2130.24N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD1_CAUCR7.437e-2131.15N-succinylglutamate 5-semialdehyde dehydrogenase 1... [more]
ASTD_SHESA9.713e-2130.92N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_ECOUT1.269e-2030.24N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_ECOL51.269e-2030.24N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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