CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_ACIAD (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=astD PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 78/248 (31.45%), Postives = 117/248 (47.18%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQ-CCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD------PFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP  VLN++ G   T G ALA    +D + FTG   TG  +    A +  K + LE+GG +  II D  D+D  V LA  + F + GQ C CA      + +  D F+++    A   ++GD      PF  GV     I  +  E +L+  ++ I+  A       +L      V P +  DV     I  +E FGP+  I ++ + D+ ++ AN TRFGL+ G+ +        M+   RAG V
Sbjct:  190 AGLPNAVLNLLQGSRET-GIALAQSEHIDGVLFTGSASTGYQLHRQLAGAPEKILALEMGGNNALIIEDIDDIDAVVHLAIQSAFISAGQRCTCARRLIIKNGQAGDAFIQRFIEVARDLVIGDWDAEPQPFMGGV-----ISVKAAEALLKAQQNLIDLGARSLLEMKQLRENSALVSPAIL-DVTAVPDIPDEEYFGPLTCIYRYDDFDEALKLANSTRFGLSVGLVSPKRALFERMLIEARAGIV 430          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL7A1_DICDI (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 68/225 (30.22%), Postives = 111/225 (49.33%), Query Frame = 2
Query:   14 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP---QIDPEQFEKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKS 676
            P V  V+ G G T G  +        +SFTG  + G+ +         K + LELGG +  ++ +DAD++  +    FA     GQ C    R +VHE +YD  +E+         +G+P + GV  GP   Q   ++F + L  I+   +    +  GG++L  + G FV+PTV + ++ D  I + E+F P+  I+KFK  DD     N+   GL++ +FT +
Sbjct:  214 PAVCCVLIGPGRTVGEQMIQDKRFGLISFTGSTEVGRRISSTVHGYFGKTI-LELGGNNAIVVAEDADIELVLRAVLFASVGTTGQRCTTCRRLFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVGPLHTQSAVKEFTEGLEEIK---KQGGKVVIGGNKLDISGGNFVEPTVVA-IEHDAPIVKTELFVPILYIMKFKNLDDAFAWNNEVPQGLSSSLFTNN 433          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL3A1_RAT (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 67/213 (31.46%), Postives = 102/213 (47.89%), Query Frame = 2
Query:   86 DKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            D + +TG    GKIV   AAK +L PVTLELGGKSP  +  D D+D A     +  F N GQ C A         + ++ VEK K ++++   G+  K   + G  I+   F++V      G+  N  +  GG        ++ PT+  DV     + Q+EIFGPV  I+  +  ++ I+  N+    LA  VF+ +      M+    +G V
Sbjct:  182 DHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK-KSLKDFYGEDAKQSRDYGRIINDRHFQRV-----KGLIDNQKVAHGG-TWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGV 386          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_VIBVY (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=astD PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.826e-20
Identity = 75/248 (30.24%), Postives = 116/248 (46.77%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYVH-ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLE-CGGDRL----GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G G   G ALA    +D L FTG  +TG ++    A    K + LE+GG +P +I D   D+D  V     + F + GQ C    R Y+      D  + +      +  V  PF    E  P + P+  E    +I   + + A L+  GG+ L         FV P +  DV +   +  +E FGP+  +++++  +  +  AN TRFGL+AG+ +         +  +RAG V
Sbjct:  187 AGLPQGVINLVQG-GKETGIALAESKGIDGLLFTGSANTGHLLHRQFAGQPGKMLALEMGGNNPMVITDHYGDLDATVYTIIQSAFISAGQRCTCARRLYIPLGEKGDALITRLVEATKKLRVDQPF---AEPAPFMGPQISEAAANFI---LAAQANLQSLGGESLIEAKAGEAAFVTPGII-DVTNIAELPDEEYFGPLLQVVRYQTLEQAVELANDTRFGLSAGLVSTDDGEWQYFVDHIRAGIV 426          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: MMSA_ANOGA (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20
Identity = 73/247 (29.55%), Postives = 110/247 (44.53%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+NV+ G    A   +  + D+  +SF G    GK + E A + N K V   +G K+  +I  DA+ +  +     A F   GQ C A S T V       ++     RA +  V      G + GP I P+  +++   + SG +  A +   G  +   G+    FV PT+ SDV  +M    +EIFGPV   L     D+ I   N   +G    +FT +  TA   +  +  G V +
Sbjct:  215 AGCPPGVVNVIHG-AHDAVNFVCDNPDIRAVSFVGSDQAGKYIYERAGR-NGKRVQCNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALS-TAVFVGEARNWIPDLVERARKLKVNAGHLPGTDLGPVISPQSKQRINELVESGAKEGAKIVLDGRNIKVEGFEKGNFVGPTIISDVTPNMKCYTEEIFGPVLVCLSVDTIDEAIELINNNPYGNGTAIFTTNGATARKFVNDIDVGQVGV 458          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_KLEP7 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=astD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20
Identity = 77/250 (30.80%), Postives = 113/250 (45.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE-RVYDEFVEKAKARAMRRIVG------DPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT--LECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G G   G AL+   D+D L FTG   TG  +    A    K + LE+GG +P I+ D  DVD  V L   + F   GQ C    R  V      D F+ +    + R I         PF  G+     I  +  +KV +     + + A   LE    RL   G  +      D+ D   +  +E+FGP+  + ++   ++ I  AN TRFGL+ G+ +   +  + ++   RAG V
Sbjct:  187 AGLPAGVLNLVQG-GRETGEALSGQADIDGLLFTGSSTTGFHLHRQLAGQPQKILALEMGGNNPLIVDDPRDVDAVVHLTIQSAFITAGQRCTCARRLLVRRGEAGDAFLSRLVTVSQRLIPAAWDAEPQPFLGGL-----ISEQAAQKVHQAWLQRVAAGAVTLLE---PRLLQAGTSLLTPGIVDMSDVANVEDEEVFGPLLGVWRYDTFEEAIALANATRFGLSCGLISPEREKFDRLLLEARAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: MMSA_AEDAE (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 71/247 (28.74%), Postives = 110/247 (44.53%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+NV+ G    A   +  +  +  +SF G    GK + E A + N K V   +G K+  +I  DA+ +  +     A F   GQ C A S T V      +++     RA +  V      G + GP I P+  +++   + SG++  A L   G  +       G FV PT+ +DV  +M    +EIFGPV   L     D+ +   N   +G    +FT +  TA   +  +  G V +
Sbjct:  215 AGCPPGVVNVIHG-AHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGR-NGKRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALS-TAVFVGEAKQWIPDLVERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKVENFENGNFVGPTILTDVSTNMKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATARKFVNEIDVGQVGV 458          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_VIBPA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio parahaemolyticus GN=astD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 76/248 (30.65%), Postives = 117/248 (47.18%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYV-HERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLEC-GGDRL----GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GV+N+V G   T G ALA    +D + FTG  +TG I+    A    K + LE+GG +P +I D+  D+D  V     + F + GQ C    R YV      D  + K         +  PF    E  P + P+      ++I   +++ A L+  GG+ L         FV P +  DV +   +  +E FGP+  +++++  D  +  AN TRFGL+AG+ +         +  +RAG V
Sbjct:  187 AGLPKGVINLVQGAKET-GIALADAKGIDGILFTGSANTGHILHRQFAGQPGKMLALEMGGNNPMVISDNYGDLDATVYTIIQSAFISAGQRCTCARRLYVPFGEKGDALITKLVEATKNIRMDQPF---AEPAPFMGPQISVAAAKFI---LDAQANLQSLGGESLIEAKAGEAAFVSPGII-DVTNIAELPDEEYFGPLLQVVRYEGLDKAVELANDTRFGLSAGLVSTDDQEWEYFVDHIRAGIV 426          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_SHEB2 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella baltica (strain OS223) GN=astD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20
Identity = 77/249 (30.92%), Postives = 117/249 (46.99%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNAT--LECGGDRLGNRGY------FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G   T G ALASH  +D L FTG   TG  + +  A    K + LE+GG +P II    D+  AV     + + + GQ C    R YV +    + +    A A+++I   P+ S      Q  P     +      G+ +     L  GG  L    +       V P +  DV     +  +E FGP+  ++++ + D  I+ AN+TR+GL+AG+   S +  +  +  +RAG V
Sbjct:  187 AGLPAGVLNLVQGEVDT-GKALASHPQLDGLFFTGSSRTGHFLHQQYAGHPGKILALEMGGNNPLIIKGVQDIKAAVHDILQSAYISSGQRCTCARRLYVEQGEQGDALIAMLADAVKQIKVGPWNS------QPQPFMGSMISETAAKGMVAAQANLLNLGGVSLVELTHLEAGTGLVSPGLI-DVTAIDALPDEEYFGPLLQLVRYSDFDQAIKLANQTRYGLSAGLLADSREDYDYFLARIRAGIV 427          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ASTD_ESCF3 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=astD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20
Identity = 81/250 (32.40%), Postives = 118/250 (47.20%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVGD------PFKSGV--EQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV 724
            AGLP GVLN+V G G   G AL++  D+D L FTG  +TG  +    +    K + LE+GG +P II D AD+D AV L   + F   GQ C    R  +      D F+ +  A + R   G+      PF  G+  EQ        +++ L  +    +    L   G  L   G  V+ T  + V D      +E+FGP+  + ++   D+ IR AN TRFGL+ G+ +   D    ++   RAG V
Sbjct:  187 AGLPSGVLNLVQG-GRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDDVADIDAAVHLTIQSAFVTAGQRCTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAHQVVTAWQE-LEAMGGRTQLAPRLLRAGTSLLTPG-IVEMTGVAGVPD------EEVFGPLLRVWRYDTFDEAIRMANNTRFGLSCGLVSSRRDKFEQLLLEARAGIV 427          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASTD_ACIAD2.164e-2031.45N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
AL7A1_DICDI2.164e-2030.22Putative aldehyde dehydrogenase family 7 member A1... [more]
AL3A1_RAT2.164e-2031.46Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
ASTD_VIBVY2.826e-2030.24N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
MMSA_ANOGA3.691e-2029.55Probable methylmalonate-semialdehyde dehydrogenase... [more]
ASTD_KLEP73.691e-2030.80N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
MMSA_AEDAE4.820e-2028.74Probable methylmalonate-semialdehyde dehydrogenase... [more]
ASTD_VIBPA4.820e-2030.65N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHEB26.296e-2030.92N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_ESCF36.296e-2032.40N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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