CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 117/247 (47.37%), Postives = 154/247 (62.35%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV++G G   G  +  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A FY+ GQ C  G+R +V   +  EF  K   R  R   G+P    +  GP +  E  E VL YI  G E  A L CGGDRL     ++G FV PTVF+D  D+M I ++EIFGPV SIL +   D+V+RRAN T FGLAAG+ T+  + A+ ++  L AG  WI
Sbjct:  195 AGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKAEFEAKILERVKRIRAGNPEDENINFGPLVSFEHMESVLGYIAKGKEQGARLLCGGDRLTGGVFDKGAFVAPTVFTDCTDEMTIVREEIFGPVMSILGYDTEDEVVRRANDTDFGLAAGIVTRDLNRAHRVIHLLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 120/247 (48.58%), Postives = 154/247 (62.35%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R ++H  V D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFMHRSVKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUSU (Betaine aldehyde dehydrogenase OS=Brucella suis GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUSI (Betaine aldehyde dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUO2 (Betaine aldehyde dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUME (Betaine aldehyde dehydrogenase OS=Brucella melitensis GN=betB PE=3 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUC2 (Betaine aldehyde dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUAB (Betaine aldehyde dehydrogenase OS=Brucella abortus GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUA2 (Betaine aldehyde dehydrogenase OS=Brucella abortus (strain 2308) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_PSEU21.695e-5747.37Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_BURCJ1.695e-5748.58Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BRUSU1.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella suis GN... [more]
BETB_BRUSI1.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella suis (s... [more]
BETB_BRUO21.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella ovis (s... [more]
BETB_BRUME1.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUMB1.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUC21.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella canis (... [more]
BETB_BRUAB1.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
BETB_BRUA21.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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