CX295025

Overview
NameCX295025
Unique NameCX295025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-13
Identity = 60/195 (30.77%), Postives = 89/195 (45.64%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            RA +AEF++T +F++    + M  +K                                +SGGH+NPAVTFG  +   +SL R + Y + Q LG+     ++K   +    S    A A+S G    + +  E+V TF LVYTV+ +A D K+      +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   60 RAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTV--GIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVF-SATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 251          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-13
Identity = 63/194 (32.47%), Postives = 86/194 (44.33%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKF---VTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAL----DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            R  LAEF  TL  V+   GS +A N      ++                         ISG  +NPAVT G    G + +L GI + I Q +G+ V   ++K        +  SA  L++GV        E+V T  LV+ V   A+    DPK   +  +AP+AIG  V A +     F G S+NPA SFGPA
Sbjct:   32 RQLLAEFFGTLFVVYIVSGSTLAANFAV---SDPIVRVCLICLVQGFAFAAIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYERDLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPK---ISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPA 219          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13
Identity = 61/205 (29.76%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   67 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P E +     RA +AEF++T +F++    + M   +   +   +                        ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K    G        A  ++ G    + +  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   43 PGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKR--SDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 244          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13
Identity = 60/183 (32.79%), Postives = 82/183 (44.81%), Query Frame = 1
Query:  109 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            AEF+ TLI +FAG  + +   K   +GA T                       +ISG H+NPAVT       +       +Y  AQ++ S  A   LK V    T S       VG   A   E +++F L++ V A A D +  ++G +A IA+G  V  NIL  G    ASMNP  + GPA
Sbjct:   84 AEFVGTLILIFAGTATAIVNQKT--DGAET---LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE-PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPA 258          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 1
Query:  268 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +ISG H NPAVT      G     +   Y +AQ+LG+T+A   L+ +  G+               ++V EI+ TF L++ +   A D +  ++G +A +A+G  +  N+L  G   GASMNPA S GPA
Sbjct:   96 HISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPGTLPTGSEVQSLVIEIITTFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPA 223          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12
Identity = 62/196 (31.63%), Postives = 88/196 (44.90%), Query Frame = 1
Query:   94 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKF-------VTNGQTTSAFALSSGVGA-WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            L+  +AEF+ T   VF G  S +  N    N    P                      +ISG H+NPAVT      G   L +   Y I+Q++GST+A   L+        V +G+    F  SS VG+   A   E ++TF L++ +   A D +  ++G +A +AIG  V  N+L       ASMNP  S GPA
Sbjct:   54 LQKLIAEFLGTYFLVFTGCAS-VVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLG----HISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGK-HDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNR--AIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPA 241          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 1
Query:  268 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +ISG H+NPAVT       +   ++   YW AQ  G+  A  +LK V +          SG   W+A++ EIV+TF +++   A A D +  ++G +A +A+G  V    +  G   G SMNPA +  PA
Sbjct:  104 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSG-PHWHALLIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPA 230          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 65/206 (31.55%), Postives = 88/206 (42.72%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX-------------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL-LKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPK--KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP 654
            +  +AEFI T I VF G GS  A   +  +G  +P+                                  NISG H+NPAVT G +          + Y IAQLLG+     + L+    G  T     A A   G+  W A++ E+V TF L+ T+   A+D +  KG  G I    IG  V   I   G   G+S+NPA +FGP
Sbjct:    6 KRCIAEFIGTFILVFFGAGSA-AVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGII----IGLTVAGIITTLGNISGSSLNPARTFGP 206          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 55/184 (29.89%), Postives = 82/184 (44.57%), Query Frame = 1
Query:  106 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +AE I T   VF+G   G+    + + G  T                       +ISG H NPAVT    +       +  LY  AQ  GS +A L L+ +      + F  +       A+V EI+++F L++ +   A D +  ++G +A IA+G  +  N+   G   GASMNPA S GPA
Sbjct:   46 IAEMIGTYFIVFSG--CGVVVVNVLYGGTIT---FPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPA 222          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 1
Query:  268 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +ISG H+NPAVT       +   ++   YW AQ  G+  A  +LK V            SG   W+A+  EIV+TF +++   A A D +  ++G +A +A+G  V    +  G   G SMNPA +  PA
Sbjct:  107 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSG-PHWHALAIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPA 233          
The following BLAST results are available for this feature:
BLAST of CX295025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
PIP16_MAIZE2.098e-1330.77Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
AQPB_DICDI2.098e-1332.47Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
PIP1_SOLLC3.578e-1329.76Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
NIP61_ARATH6.103e-1332.79Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
NIP11_MAIZE7.971e-1334.62Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]
NIP11_ARATH1.041e-1231.63Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
NIP22_MAIZE1.360e-1233.85Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
AQPM_METTM1.360e-1231.55Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
NIP41_ARATH2.319e-1229.89Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
NIP23_MAIZE2.319e-1233.85Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05065G07SK DroRLeaf1 Citrus clementina cDNA clone C05065G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295025 ID=CX295025; Name=CX295025; organism=Citrus clementina; type=EST; length=657bp
CCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAA
CATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGG
CAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAA
GGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCC
CTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTG
CTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTC
ACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCT
CTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTA
AGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGA
GTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACT
AGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGG
GGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTG
GCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGG
GCCAGCT
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