CX295025

Overview
NameCX295025
Unique NameCX295025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.197e-38
Identity = 88/202 (43.56%), Postives = 113/202 (55.94%), Query Frame = 1
Query:   52 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            + +GH  EA+ PD  R  L E + T +FVF G G+ M  +  T  G+                         +ISGGHVNPAVT    VGG+++L R  LY  AQ+L S+ AC LL+++T G  T   AL+ GVG    VV E V TF L++ +YAT LDP+K  L    P+  G +VGAN +AG A  GASMNPA SFGPA
Sbjct:    4 LTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMT-DGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPA 203          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.595e-37
Identity = 87/208 (41.83%), Postives = 114/208 (54.81%), Query Frame = 1
Query:   34 IMPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            ++P+  + +GH  EA  P  LRA   E + T +FVF G  S +   K    GA   +                     ++SGGH+NPAVT    VGG+I+L R  LY  AQL GS++ACLLL+ +T G  T   AL+ GVG    V  E V TF L+  + AT LDP++ +     P+  G +VGAN +AGGA  GASMNPA SFGPA
Sbjct:    3 LLPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPA 209          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.493e-35
Identity = 85/198 (42.93%), Postives = 114/198 (57.58%), Query Frame = 1
Query:   73 EATHPDA--LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            EA  PD   +RA LAE + T +FVF G  + MA       G   P +                     ++SGGH+NPAVT G  V G+I+ LR +LY  AQLL S++AC+LL++++ G  T   AL +G+     +V E+++TF L++  YA  LDP +  + TI P+  G IVGAN LAGG F GASMNPA SFGPA
Sbjct:   16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPA 212          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.547e-35
Identity = 83/196 (42.35%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   73 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            E      +RA LAE + T +FVF G  + MA       GA  P +                     ++SGGH+NPAVT      G+I+  R  LY  AQLL S++AC+LL+++T G  T    L SG+G    +V EI++TF L++ VYAT LDP + S+    P+  G IVGAN +AGG F GASMNPA SFGPA
Sbjct:   12 EVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDP-RSSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPA 206          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.651e-34
Identity = 81/189 (42.86%), Postives = 107/189 (56.61%), Query Frame = 1
Query:   94 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +RA LAE + T +FVF G  + MA       G   P +                     ++SGGH+NPAVT G  V G+I+ LR +LY  AQLL S+ AC+LL+F++ G  T   AL  G+     +V E+++TF L++  YA  LDP +  +  I P+  G IVGAN LAGG F GASMNPA SFGPA
Sbjct:   23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPA 210          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.383e-33
Identity = 79/190 (41.58%), Postives = 105/190 (55.26%), Query Frame = 1
Query:   88 DALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +ALR  ++EFIST  FV A  GS M+  KL     + P                      N+SGGHVNPAVTF   V G IS+   + YW +Q++ S +ACL+LK     Q    + ++  +  + A V E V+ F LVYTV+ TA DP++G    + PI IGF+ GAN+LA G F G SMNPA +FG A
Sbjct:   20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSA 208          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 5.871e-32
Identity = 78/199 (39.20%), Postives = 110/199 (55.28%), Query Frame = 1
Query:   85 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLG--------TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P ALRA  AEF ST +FVF   GS ++   LT +  +  S                     ++SGGHVNPAVTF   +GG+I++   I YW +Q+LGST ACL+L +++ GQ      ++  +  + A + E V+TF +VYTV+  A DP+ G  G         +  + +G + GA +LA G+  GASMNPA SFGPA
Sbjct:   14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPA 211          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.426e-27
Identity = 80/217 (36.87%), Postives = 112/217 (51.61%), Query Frame = 1
Query:   37 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTH-NGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA-LDPK-KGSLG-------TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            M   N+ V   R  + P +LR+ LAEFIST +FVF   GS ++   LT  +  ++                       ++SGGHVNPAVTF   +GG I +   + YW +QLLG+T ACL L   + G+      ++  +  +   V E V+TF LVYTV+     +P+ +G  G        +  +A+G   GA +LA GA  GASMNPA SFGPA
Sbjct:    1 MASNNLLVDLKRCFSAP-SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPA 216          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22
Identity = 70/190 (36.84%), Postives = 94/190 (49.47%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            RA  AEF +TL +VF G G+ + +       A  P                      +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA
Sbjct:   11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPA 192          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 69/190 (36.32%), Postives = 94/190 (49.47%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            RA  AEF ++L +VF G G+ + +       A  P                      +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA
Sbjct:   11 RAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPA 192          
The following BLAST results are available for this feature:
BLAST of CX295025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
TIP43_MAIZE4.197e-3843.56Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP42_ORYSJ1.595e-3741.83Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP42_MAIZE1.493e-3542.93Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP41_ORYSJ2.547e-3542.35Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP41_MAIZE1.651e-3442.86Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP51_ARATH2.383e-3341.58Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP51_ORYSJ5.871e-3239.20Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP51_MAIZE7.426e-2736.87Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
MIP_SHEEP7.193e-2236.84Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_BOVIN1.602e-2136.32Lens fiber major intrinsic protein OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionC05065G07SK DroRLeaf1 Citrus clementina cDNA clone C05065G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295025 ID=CX295025; Name=CX295025; organism=Citrus clementina; type=EST; length=657bp
CCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAA
CATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGG
CAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAA
GGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCC
CTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTG
CTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTC
ACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCT
CTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTA
AGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGA
GTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACT
AGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGG
GGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTG
GCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGG
GCCAGCT
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