CX295026

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB2_METVS (DNA-directed RNA polymerase subunit B'' OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpoB2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 55/182 (30.22%), Postives = 95/182 (52.20%), Query Frame = 3

Query:    3 RAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVR-DSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            RA +IL +  L ++ + +     KC Y+  M +  +E  L     DDKD+  NKRL+L+G L+    EDLF+   +++ K +   L + +  ++    Q  VR D +T  +   ++TGN     +   R G++Q+L R S++ T+  + RV     +S+     R L  +QWG +CP +TP+
Sbjct:  289 RAETILCNYLLPHMGIESEKLGAKCKYLGRMAKNSIELYLGSRVEDDKDHYANKRLKLAGDLM----EDLFRHSFNQLIKDIKYQLERQAIRNKEPSIQAAVRSDVLTERMRHAMATGN-----WVGGRTGVSQLLDRTSYLATVSQLRRVVSPLSRSQPHFEARDLHATQWGKICPSETPE 461          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB2_HALSA (DNA-directed RNA polymerase subunit B'' OS=Halobacterium salinarium GN=rpoB2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16
Identity = 51/159 (32.08%), Postives = 86/159 (54.09%), Query Frame = 3

Query:   72 KCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVR-DSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            K +Y+  M     E  L +   DDKD+  NKRL++SG L+    +DLF+T ++++ + V   L + +  +R      +VR D +T  LE  ++TGN+        R G++Q++ R  F+G L H+ R+     +S+     R L  +QWG +CP +TP+
Sbjct:  321 KAYYLCRMAEACFELALGRREADDKDHYANKRLKVSGDLM----KDLFRTALNKLARDVKYQLERANMRNRELTVNTVVRSDVLTERLEHPIATGNW-----VGGRSGVSQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPE 470          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB_SULAC (DNA-directed RNA polymerase subunit B OS=Sulfolobus acidocaldarius GN=rpoB PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 50/181 (27.62%), Postives = 91/181 (50.28%), Query Frame = 3

Query:    3 RAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            +A  ++   FL ++     + + K +Y+A  + +++E  L +   DDKD+  NKR+ L+G L + LF   FK  + ++   ++       R  R  L+  +  D IT  +   L+TGN     +   R G++Q+L R +++  L H+ RV     + +     R L  +QWG +CP +TP+
Sbjct:  286 KAEQVIDKYFLPHLGTSPEDRKKKGYYLASAVNKILELYLGRREPDDKDHYANKRVRLAGDLFTSLFRVAFKAFVKDLVYQLE---KSKVRGRRLSLTALVRADIITERIRHALATGN-----WVGGRTGVSQLLDRTNWLSMLSHLRRVVSSLARGQPNFEARDLHGTQWGRMCPFETPE 458          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB2_METTW (DNA-directed RNA polymerase subunit B'' OS=Methanobacterium thermoautotrophicum (strain Winter) GN=rpoB2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.812e-15
Identity = 52/182 (28.57%), Postives = 93/182 (51.10%), Query Frame = 3

Query:    3 RAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKP-SRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            RA  ++    L ++    +    K  Y+A M   +++ +  +    DKD+  NKRL +SG L+    EDLF+   + + + +   L +  +R     + Q +  D ++  L+  ++TGN+        R G++Q+L R S++GTL HM RV     +S+     R L P+Q+G +CP +TP+
Sbjct:  307 RAEDVIDRYLLPHIGTEPDKRLEKAVYLAEMTEMLLQVISGERKPHDKDHYTNKRLRVSGDLM----EDLFRVAFTSLTRDMSYRLERSLARGKEPSVKQAVRSDVLSENLKHAIATGNW-----VGGRAGVSQLLDRTSYMGTLSHMRRVVSPLSRSQPHFEARDLHPTQFGKICPNETPE 479          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB2_METTH (DNA-directed RNA polymerase subunit B'' OS=Methanobacterium thermoautotrophicum GN=rpoB2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 3

Query:    3 RAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKP-SRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            RA  ++    L ++         K  Y+A M   +++ +  +    DKD+  NKRL +SG L+    EDL +   + + + +   L +  +R     + Q +  D +T  L+  ++TGN+        R G++Q+L R S++GTL HM RV     +S+     R L P+Q+G +CP +TP+
Sbjct:  312 RAEDVIDRYLLPHIGTEPEKRLEKATYLAEMTEMLLQVISGERRPHDKDHYTNKRLRVSGDLM----EDLLRVAFTSLSRDMSYQLERSLARGKEPSVKQAVRSDVLTENLKHAIATGNW-----VGGRAGVSQLLDRTSYMGTLSHMRRVVSPLSRSQPHFEARDLHPTQFGKICPNETPE 484          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB_THEAC (DNA-directed RNA polymerase subunit B OS=Thermoplasma acidophilum GN=rpoB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = 3

Query:   72 KCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            K  Y+  M R ++E  L     DDKD++ NKR++L+G L+  LF   F++++ +++  ++      +R     +   + +D +T  +   +STGN+   R      G++Q+L R+S + T+ H+ R+     +++     R L P+QWG +CP +TP+
Sbjct:  357 KAIYLGRMARSLLELSLGIRKEDDKDHLANKRIKLAGDLMDELFRSAFQSVMKDLKYQLE---KTYNRKRGIKIRPAVRQDLLTQRVLHAMSTGNWIGGR-----TGVSQLLDRVSNLSTISHLRRIISPLTRTQPHFEARDLHPTQWGRICPNETPE 506          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPO2_MIMIV (DNA-directed RNA polymerase subunit 2 OS=Acanthamoeba polyphaga mimivirus GN=RPO2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14
Identity = 53/170 (31.18%), Postives = 94/170 (55.29%), Query Frame = 3

Query:   72 KCFYVAVMLRRMVEAMLNKD-------AMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQK---TVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRV-SPQFEKS-RKVSGPRALQPSQWGMLCPCDTPK 545
            K  Y+  M+ ++++  L            DD+D + NKR++L+G+L+  LF+  +  M+++  K   T +I   KP      ++   I  +SI  GL + LSTGNF        RKG++Q+L R++ + +L +M RV +P  + S  K++ PR L  +Q+G +CP ++P+
Sbjct:  355 KAHYICYMIHKLLKCYLRGAREVEEYRGCDDRDSMVNKRIDLTGRLLGGLFKQFYDKMLNDCNKIFRTKNIDDKKPP-----NIIPHIKPNSIEQGLRQALSTGNFG----SQSRKGLSQMLNRMNHLHSLSYMRRVITPTVDASTMKMTSPRHLHNTQYGSMCPLESPE 515          

BLAST of CX295026 vs. ExPASy Swiss-Prot
Match: RPOB2_METJA (DNA-directed RNA polymerase subunit B'' OS=Methanocaldococcus jannaschii GN=rpoB2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13
Identity = 49/182 (26.92%), Postives = 91/182 (50.00%), Query Frame = 3

Query:    3 RAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVR-DSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPK 545
            RA ++L +  L ++ V   +F  K  ++ +M R  +E        DDKD+   KR +L+G L+    EDLF+   S++ K +   L + +  ++    Q  VR D +T  ++  ++TG +        + G++Q+L R S++ T   + R+     +S+     R L  + WG +CP +TP+
Sbjct:  289 RAETVLCNYLLPHLGVTKEDFPKKIRFLGIMARNALELYFGYRGEDDKDHYAYKRAKLAGDLM----EDLFRYAFSQLVKDIKYQLERQTLRNKTPSIQAAVRSDILTERIKHAMATGTW-----VGGKTGVSQLLDRTSYLATNSQLRRIVSPLSRSQPHFEARELHGTHWGKICPSETPE 461