CX295029

Overview
NameCX295029
Unique NameCX295029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.024e-54
Identity = 107/177 (60.45%), Postives = 128/177 (72.32%), Query Frame = 1
Query:   97 PNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG-GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-FDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNR--PKLACTIAECGEM 615
            P   NP+VFFD+T+G  P GRI  ELF D+ P+TAENFRQFCTGE +   G P GYKG +FHR+I +FM Q GDFL GDG+G T IYG K F DENF+ KH  PGLLSMAN+GPN+NG QFFIT     +LD KHVVFG+V+ DG+ VV+K+EN  TG   +  P L   IA+CGEM
Sbjct:    7 PASGNPLVFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESKNNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVV-DGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGEM 182          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.555e-53
Identity = 106/177 (59.89%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   97 PNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG-GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-FDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNR--PKLACTIAECGEM 615
            P   NP+VFFD+TIG  P GRI  ELF D+ PKTAENFRQFCTGE +   G P GYKG +FHR+I +FM Q GDFL GDG+G T I+G K F+DENF  KH  PGLLSMAN+GPN+NG QFFIT     +LDNKHVVFG+V  +G+ VV+K+E   TG   +  P L   I++CGEM
Sbjct:    7 PESGNPLVFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKTPVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVF-EGMDVVKKMEATKTGYRGKDMPNLDVVISQCGEM 182          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.334e-51
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 1
Query:  112 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            P VFFD+TI   P GRI MEL+ DI PKTAENFR  CTGE    K G P+ +KG +FHR+I +FMIQ GDF +G+G+G  SIYG KF DENF  KHTGPG+LSMAN+GPN+NG QFF+   K  WLD KHVVFGRV+ +GL +V K+E   +  +  PK  C IA+CG++
Sbjct:    4 PRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVV-EGLDIVSKVEGNGSS-SGTPKSECLIADCGQL 171          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 5.199e-51
Identity = 106/178 (59.55%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   91 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +P N KNP VFFDV IG    GRI +ELFADI PKTAENFR  CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSMAN+GPN+NG QFFIT      LD KHVVFG+V+  GL V R +ENV      +P   C IAECGE+
Sbjct:    9 KPSNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVI-KGLGVARMLENVEVN-GEKPAKLCVIAECGEL 184          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 5.199e-51
Identity = 106/178 (59.55%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   91 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +P N KNP VFFDV IG    GRI +ELFADI PKTAENFR  CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSMAN+GPN+NG QFFIT      LD KHVVFG+V+  GL V R +ENV      +P   C IAECGE+
Sbjct:    9 KPSNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVI-KGLGVARTLENVEVN-GEKPAKLCVIAECGEL 184          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.868e-51
Identity = 102/169 (60.36%), Postives = 122/169 (72.19%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            NP VFFDV+  + P GRI MEL AD+ P+TAENFR  CTGE  KG    GYKGC FHRVI +FM+Q GDF   +G+G  SIYG+KF DENF  KHTGPG LSMAN+GPN+NG QFFIT  KC WLD KHVVFGRV  +G+ VV+ IE++ + PN  P+    I  CG++
Sbjct:    3 NPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGE--KG---FGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVT-EGMDVVQNIESLGS-PNGTPRAKIIIDNCGQL 164          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.868e-51
Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            NP VFFD+TIG  PAGR+ MELFAD  PKTAENFR  CTGE   G  G P+ YKG  FHRVI  FM Q GDF  G+G+G  SIYG KF+DENF+ KHTGPG+LSMAN+GP +NG QFFI  AK +WL+ KHVVFG+V+ +G+ V++K E V +  + R      IA+CG++
Sbjct:    3 NPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVV-EGMDVIKKAEAVGSS-SGRCSKPVVIADCGQL 171          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50
Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +P VFFD+TIG  PAG+I MEL+ D  PKTAENFR  CTGE   G  G P+ +KG  FHRVI +FM Q GDF KG+G+G  SIYG KF+DENF  KHTGPG+LSMAN+G N+NG QFFI   K DWLD KHVVFG+V+ +GL VV+ IE + +  + +P     IA+CGE+
Sbjct:    4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVV-EGLDVVKAIEKIGSS-SGKPTKPVVIADCGEI 172          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.976e-50
Identity = 98/166 (59.04%), Postives = 119/166 (71.69%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            V+FDV IG   AGRI M LF ++ PKT ENFR  CTGE +      GYKG  FHR+IKDFMIQ GDF +G+G+G  SIYG KF+DENF  KHTGPG+LSMAN+GPN+NG QFFI   K  WLDNKHVVFG+V+ +G+ +VR +E+  T   + PK  C I  CGE+
Sbjct:   97 VYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKK-----YGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVI-EGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50
Identity = 100/173 (57.80%), Postives = 121/173 (69.94%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM*N 621
            NP VFFD+ IG + AGR+ MELFAD+ P+TA NFR  CTGE    K G  + YKG  FHR+I  FM Q GDF +G+G+G  SIYG KF+DENF  KHTGPG+LSMANSGPN+NG QFFI   K  WLD KHVVFG+V+ DG  VV+ +E+V +   N P     I +CGE+ N
Sbjct:    3 NPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVV-DGYNVVKAMEDVGSDMGN-PSERVVIEDCGELKN 173          
The following BLAST results are available for this feature:
BLAST of CX295029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIH_NEUCR5.024e-5460.45Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPIH_GIBZE5.555e-5359.89Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
CYP7_CAEEL2.334e-5158.82Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPID_RAT5.199e-5159.5540 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_MOUSE5.199e-5159.5540 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPIA1_RHIOR8.868e-5160.36Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
CYPH_SOLLC8.868e-5159.06Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CP19B_ARATH1.513e-5059.06Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP20C_ARATH1.976e-5059.04Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CP19C_ARATH3.370e-5057.80Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05065G11SK DroRLeaf1 Citrus clementina cDNA clone C05065G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295029 ID=CX295029; Name=CX295029; organism=Citrus clementina; type=EST; length=727bp
AAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGCGAGAGAGATTGATGGC
ATCCGGAGGAGGAGGAGGAGGAAGTGTGGAGTGGCACGTGCGGCCTCCAA
ACCCAAAAAACCCAATCGTATTTTTCGATGTCACAATCGGTACCATCCCC
GCTGGTCGTATCAAGATGGAGCTCTTCGCCGACATCGCCCCTAAAACCGC
CGAAAATTTTAGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATTGC
CTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTATG
ATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCAAT
TTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGGTC
CAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGGGTGCCAG
TTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGCACGTTGT
ATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAGATCGAGA
ATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCACTATCGCA
GAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTGGCATTTC
TAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTGTATATTG
TACGCTTTTAAGATAGATTGATGTGAC
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