CX295029

Overview
NameCX295029
Unique NameCX295029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.266e-38
Identity = 81/159 (50.94%), Postives = 104/159 (65.41%), Query Frame = 1
Query:  151 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGD-GLLVVRKIENVATGPNN---RPKLACTIAECGEM 615
            +GRI   L+ D+ PKTA NF++ CTG+        GYKG  FHR+I +FM+Q GDF +G+G+G  SIYG KF DENF  KH  PGLLSMAN+GPN+NG QFF+T     WLD +HVVFG V  D  + VV+ +E  ATG ++   R     TI +CG +
Sbjct:   72 SGRINFTLYDDVVPKTARNFKELCTGQNG-----FGYKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALE--ATGSSSGAIRYSKKPTIVDCGAL 223          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.865e-38
Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  121 FFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 609
            +F ++I       I  ELF ++ PKT +NF   C G + K G  + YKG +FHRVIK+FM+Q GDF +G+G+G  SIYG KF+DENF  KH  P LLSMAN+GPN+NG QFFIT      LD KHVVFG+V+  G   VR IEN+ T  N+ P +   I ECG
Sbjct:    6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNG-FEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVI-QGKSTVRTIENLET-KNDDPVVPVVIEECG 165          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.124e-37
Identity = 81/165 (49.09%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  121 FFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +FDV+    P GRI  EL+ D+ P+T  NFRQ C     KG     +K   FHRVI DFMIQ GDF  G+G+G  SIYG KF+DENF  KH   G+LSMAN+GPN+NG QFFIT  K  WLD KHVVFG+V+     VV+ +E   +  + +      I +CG +
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-----FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGS-QSGKTSSVLKIEDCGTL 163          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 3.272e-37
Identity = 84/169 (49.70%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  112 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 609
            P   FD+ I   P GRI  +LF+DI PKT +NF   C+GE   G   G  + YKG  FHRV+K+FMIQ GDF +G+G G  SIYG  F DENFI KH    LLSMAN G ++NG QFFIT      LD  HVVFG V+  G  V+ +IEN+ T   +RP     + +CG
Sbjct:    7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVI-SGFEVIEQIENLKTDAASRPYADVRVIDCG 174          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.272e-37
Identity = 84/169 (49.70%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  112 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 609
            P   FD+ I   P GRI  +LF+DI PKT +NF   C+GE   G   G  + YKG  FHRV+K+FMIQ GDF +G+G G  SIYG  F DENFI KH    LLSMAN G ++NG QFFIT      LD  HVVFG V+  G  V+ +IEN+ T   +RP     + +CG
Sbjct:    7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVI-SGFEVIEQIENLKTDAASRPYADVRVIDCG 174          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.273e-37
Identity = 84/164 (51.22%), Postives = 104/164 (63.41%), Query Frame = 1
Query:  121 FFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 612
            FFD+  G    GRI  ELF D+ P T  NFR+ CT +        GYKG  FHR+I  FM Q GDF  GDG+G  SIYG+KF DENF  KH     LSMAN+GPN+NG QFFIT   C WLD KHVVFG+V+  G+ VV+K+E++ +  + +P     I +CGE
Sbjct:    6 FFDIKAGDERLGRIIFELFNDV-PDTTRNFRELCTHKNN-----FGYKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFS-LSMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVV-SGIDVVKKMESLGS-TSGKPSKKIIIEDCGE 160          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 5.581e-37
Identity = 85/171 (49.71%), Postives = 105/171 (61.40%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLP-----VGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            VF D+++     GRI++ LF + APKT ENFR  CTGE   G  P     + YK  +FHR++K FMIQ GD  +GDG G  SIYG  FDDE F  KH+ P LLSMAN GPNSN  QFFIT A     + KHVVFG V+  G  VV  I+N+A    ++P     I+ CGE+
Sbjct:    7 VFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEV--GMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVV-KGQNVVDYIDNLAVDDKSKPLAKVLISNCGEL 174          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.288e-37
Identity = 84/164 (51.22%), Postives = 100/164 (60.98%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 609
            VFFDV  G     +I  +L+ D+ PKTA NFR+  TG   +G    GYKG  FHRVI DFM Q GDF   +G+G  SIYG KF DENF  KHT P LLSMAN+GPN+NG QFFIT   C WLD KHVVFG V+ DG   +   +   +    +PK    I + G
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGS--RG---FGYKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVV-DGFDTLELFKK-NSSQQGKPKTTIKIVDSG 160          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 85/166 (51.20%), Postives = 96/166 (57.83%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            V+FD+  G    GRI M L+    P+T ENF Q       K    +GY    FHRVI +FMIQ GDF    G G  SI+G+ F DENF  KH  PG LSMAN G N+NG QFFIT   C WLD KHVVFG VL DG+ VV  IENV T   N P     I E GE+
Sbjct:   36 VYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLTISRDPK----MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVL-DGMDVVHYIENVKTDSRNMPVKEVIIVESGEL 196          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 84/171 (49.12%), Postives = 102/171 (59.65%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLP-----VGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            VF D+ +   P GRI+++LF   APKT ENFR  CTGE   G  P     + YKG + HRV+K FMIQ GD   GDG G  SIYG  FDDE F+ KH+ P LLSMAN GPNSN  QFFIT A     + KHVVFG V+  G  VV  ++N+     ++P     I   GE+
Sbjct:    8 VFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEV--GMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVI-KGREVVDVLDNLEVDGKSKPIAKVRIFNSGEL 175          
The following BLAST results are available for this feature:
BLAST of CX295029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
CYPH_NEUCR2.266e-3850.94Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_SCHPO3.865e-3851.5340 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
CYPH_UROFA1.124e-3749.09Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
NKTR_MOUSE3.272e-3749.70NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN3.272e-3749.70NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPIA_SCHMA4.273e-3751.22Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
CYP9_CAEEL5.581e-3749.71Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_PARPR7.288e-3751.22Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
CYPD_YEAST4.724e-3651.20Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
CYP9_CAEBR6.170e-3649.12Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC05065G11SK DroRLeaf1 Citrus clementina cDNA clone C05065G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295029 ID=CX295029; Name=CX295029; organism=Citrus clementina; type=EST; length=727bp
AAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGCGAGAGAGATTGATGGC
ATCCGGAGGAGGAGGAGGAGGAAGTGTGGAGTGGCACGTGCGGCCTCCAA
ACCCAAAAAACCCAATCGTATTTTTCGATGTCACAATCGGTACCATCCCC
GCTGGTCGTATCAAGATGGAGCTCTTCGCCGACATCGCCCCTAAAACCGC
CGAAAATTTTAGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATTGC
CTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTATG
ATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCAAT
TTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGGTC
CAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGGGTGCCAG
TTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGCACGTTGT
ATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAGATCGAGA
ATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCACTATCGCA
GAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTGGCATTTC
TAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTGTATATTG
TACGCTTTTAAGATAGATTGATGTGAC
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