CX295029

Overview
NameCX295029
Unique NameCX295029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.401e-50
Identity = 102/174 (58.62%), Postives = 120/174 (68.97%), Query Frame = 1
Query:  100 NPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +P  P V+FD++IG    GRI MEL+AD+ PKTA+NFR  CTGE    K G P+ YKG  FHRVIK FMIQ GDF  GDG+G  SIYG+KFDDE F  KH  P LLSMAN+GPN+NG QFFIT      LD KHVVFG VL +G  VVR+IEN+ T   +RP     I +CGE+
Sbjct:    7 SPARPRVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVL-NGKSVVRQIENLTTQSGDRPAKEALIVDCGEL 179          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50
Identity = 100/171 (58.48%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            NP VFFD+ I   PAGRI MEL+AD  P+TAENFR  CTGE   G  G P+ YKG  FHRVI +FM Q GDF  G+G+G  SIYG KF DENFI +HTGPG+LSMAN+G  +NG QFFI   K +WLD KHVVFG+V+ +G+ VVR IE V +G + +     TIA+CG++
Sbjct:    3 NPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVI-EGMNVVRDIEKVGSG-SGKTSRPVTIADCGQL 171          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50
Identity = 100/171 (58.48%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            NP VFFD+++G  PAGRI MELFAD  P+TAENFR  CTGE   G  G P+ YK   FHRVI  FM Q GDF  G+G+G  SIYG KF DENFI KHTGPG+LSMAN+GPN+NG QFFI  AK +WLD KHVVFG+V+ +G+ VV+ IE V +  + R      + +CG++
Sbjct:    3 NPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVV-EGMDVVKAIEKVGSS-SGRTAKKVVVEDCGQL 171          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.673e-49
Identity = 104/178 (58.43%), Postives = 120/178 (67.42%), Query Frame = 1
Query:   91 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +P NP NP VFFDV IG    GRI +ELFADI PKTAENFR  CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSMAN+G N+NG QFFIT      LD KHVVFG+V+  G+ V R +ENV      +P   C IAECGE+
Sbjct:    9 KPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVI-KGIGVARILENVEV-KGEKPAKLCVIAECGEL 184          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.673e-49
Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 1
Query:  106 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            + P VFFDV+IG  PAGR+ MELF D+ PKTAENFR  CTGE   G  G+ + +KG +FHR+I +FMIQ GDF + +G+G  SIYG+KF DENF  KHTGPG LSMAN+GPN+NG QFFI      WLD  HVVFG+V  DG+ VV+KIE + +  +  P    TIA+CGE+
Sbjct:   20 QRPKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVT-DGMSVVKKIEKMGS-RSGAPAKTVTIADCGEL 189          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.184e-49
Identity = 96/168 (57.14%), Postives = 124/168 (73.81%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            VFFD+TIG   +GRI MEL+ D+ PKTA NFR  CTGE    K G P+ +KG +FHR+I +FMIQ GDF +G+G+G  SIYG KF DENF  KHTGPG+LSMAN+GPN+NG QFF+   K +WLD KHVVFGRV+ +GL VV+ +E+  +  + +P   C IA+CG++
Sbjct:    6 VFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVV-EGLDVVKAVESNGS-QSGKPVKDCMIADCGQL 171          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 195.282 bits (495), Expect = 2.853e-49
Identity = 103/178 (57.87%), Postives = 120/178 (67.42%), Query Frame = 1
Query:   91 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            +P NP NP VFFDV IG    GRI +ELFADI PKTAENFR  CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSMAN+G N+NG QFFIT      LD KHVVFG+V+  G+ V + +ENV      +P   C IAECGE+
Sbjct:    9 KPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVI-KGMGVAKILENVEV-KGEKPAKLCVIAECGEL 184          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.853e-49
Identity = 98/168 (58.33%), Postives = 121/168 (72.02%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            VFFD+TIG    GRI MEL+ DI PKTAENFR  CTGE  KG  G  + +KG +FHR+I +FMIQ GDF +G+G+G  SI+G KFDDENF  KHTGPG+LSMAN G N+NG QFF+   K  WLD KHVVFG+V+ +G+ VV+ IE+  +  +  P   C IA+CGEM
Sbjct:    6 VFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVI-EGMDVVKAIESKGS-EDGAPSAPCVIADCGEM 171          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.726e-49
Identity = 97/170 (57.06%), Postives = 119/170 (70.00%), Query Frame = 1
Query:  112 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE-YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-FDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            P+VF D+ I     GRIK+ LF+ I PKTAENFRQFCTGE       P+GYK   FHR+I+ FMIQ GDF+ GDG+G  +I+  + F DENF  KH  PGLLSMAN+G +SNGCQFFIT   CD+LD KHVVFG V+ +G  +V++IE+   G N+RPK    I ECGEM
Sbjct:    5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVI-EGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.726e-49
Identity = 101/171 (59.06%), Postives = 121/171 (70.76%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            NP V+FD+TIG  P GRI  ELF DI PKTAENFR  CTGE  +G  G P+ Y+G  FHR+IK+FMIQ GDF  G+G+G  SIYG KF+DENF+ KH  P LLSMAN+GP +NG QFFIT      LD KHVVFG+VL  G  VVR +EN+ T  ++RP     IA+CGE+
Sbjct:    3 NPRVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVL-KGKAVVRALENLET-VSDRPVEDAVIAKCGEL 171          
The following BLAST results are available for this feature:
BLAST of CX295029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPID_GIBZE4.401e-5058.62Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CYPH_LUPLU7.508e-5058.48Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPH_CATRO7.508e-5058.48Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
PPID_HUMAN1.673e-4958.4340 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
CYP1_CAEEL1.673e-4957.56Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CYP3_CAEEL2.184e-4957.14Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
PPID_BOVIN2.853e-4957.8740 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
CYP2_CAEEL2.853e-4958.33Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
PPIH_SCHPO3.726e-4957.06Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPID_RHIOR3.726e-4959.06Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]

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Properties
Property NameValue
Genbank descriptionC05065G11SK DroRLeaf1 Citrus clementina cDNA clone C05065G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295029 ID=CX295029; Name=CX295029; organism=Citrus clementina; type=EST; length=727bp
AAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGCGAGAGAGATTGATGGC
ATCCGGAGGAGGAGGAGGAGGAAGTGTGGAGTGGCACGTGCGGCCTCCAA
ACCCAAAAAACCCAATCGTATTTTTCGATGTCACAATCGGTACCATCCCC
GCTGGTCGTATCAAGATGGAGCTCTTCGCCGACATCGCCCCTAAAACCGC
CGAAAATTTTAGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATTGC
CTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTATG
ATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCAAT
TTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGGTC
CAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGGGTGCCAG
TTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGCACGTTGT
ATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAGATCGAGA
ATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCACTATCGCA
GAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTGGCATTTC
TAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTGTATATTG
TACGCTTTTAAGATAGATTGATGTGAC
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