CX295029

Overview
NameCX295029
Unique NameCX295029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 2.116e-44
Identity = 97/166 (58.43%), Postives = 110/166 (66.27%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            V+FD+  G  P GRI M L+    PKTAENFR   TGE  KG    GY+G  FHRVIK FMIQ GDF KGDG+G  SIYG KF DENF  KH+  GLLSMAN+G ++NG QFFIT     WLD KHVVFG VL +G  VV KIEN  TGP + P     IA+ GE+
Sbjct:   37 VYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGE--KG---FGYEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVL-EGYDVVEKIENTKTGPRDAPAEPIKIAKSGEL 196          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.116e-44
Identity = 90/164 (54.88%), Postives = 112/164 (68.29%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 609
            V+FD++I   PAGRI+ +LF D+ PKTA+NFR  CTGE        GYKG +FHRVI  FM+Q GDF +GDG+G  SIYG KF DENF  KH+ PGLLSMAN+GPN+NG QFFIT   C WLD  HVVFG+V    + +V KIE++ +  +   K    I +CG
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQG-----FGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVT-KNMELVSKIESLGSA-SGAVKAKVVIEDCG 159          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.763e-44
Identity = 94/169 (55.62%), Postives = 113/169 (66.86%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            NP+V+ DV     P GR+ +EL AD+ PKTAENFR  CTGE  KG    GYKG  FHRVI  FM QAGDF   +G+G  SIYG +F DENF  KH GPG+LSMAN+GPN+NG QFFI   K DWLD KHVVFG V  +G+ VV+KIE+  +      K    I +CG++
Sbjct:   44 NPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGE--KG---FGYKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHV-KEGMDVVKKIESFGSKSGKTSK-KIVITDCGQL 205          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.763e-44
Identity = 96/166 (57.83%), Postives = 112/166 (67.47%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            VFFDV IG    GRI + LF  + PKT ENF    TGE  KG    GYKG +FHRVIKDFMIQ GDF +GDG+G  SIYG  F DENF  KH G G +SMAN+GP++NG QFFIT  K  WLD KHVVFG+VL DG+ VV  IE  AT  ++RP   C+I   G++
Sbjct:   40 VFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGE--KG---YGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVL-DGMTVVHSIELQATDGHDRPFTDCSIVNSGKI 199          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44
Identity = 91/166 (54.82%), Postives = 111/166 (66.87%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            V+FD  IG  P GR+   LF    PKT +NF    TGE  KG    GYK  +FHRVIKDFMIQ GDF +GDG+G  SIYG +F DENF  KH GPG +SMAN+G ++NG QFFIT  K  WLD KHVVFG+VL +G+ VVRK+EN  T   ++P     I +CG++
Sbjct:   46 VYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGE--KG---FGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVL-EGMDVVRKVENTKTDSRDKPLKDVIIVDCGKI 205          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44
Identity = 91/169 (53.85%), Postives = 116/169 (68.64%), Query Frame = 1
Query:  118 VFFDVTIGTIP---AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            V+FD+++G      AGRI + L+ D  P+T ENFR  CTGE  KG    GYKG  FHRVI+DFMIQ GDF KG+G+G  S+YG  F DENF   H GPG+LSMAN+GPN+NG QFFI   K  WLD +HVVFG+V+ +G+ VV+ IE   T   +RP+    IA+CG++
Sbjct:   92 VYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGE--KG---FGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVI-EGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44
Identity = 95/168 (56.55%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  121 FFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            F D++IG    GRI +EL+ D+ PKTAENFR  CTGE   G   G+P+ YKG +FHRVIK FMIQ GD    DG+G  SIYG KFDDENF  KH   G+LSMANSGPN+NG QFFIT  +   LD KHVVFGRV   G+ VVR IE+V+    + P     I +CGE+
Sbjct:    7 FMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVT-KGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 98/176 (55.68%), Postives = 116/176 (65.91%), Query Frame = 1
Query:  106 KNPIVFFDVTIGTIPAGRIKMEL----FADIAPKTAENFRQFCTGEYRKGGL--PVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            + P V+FD+ IG+  AGRI +EL    F D+ PKTAENFR  CTGE   G    P+ YKG  FHRVIK FMIQ GDF   +G+G  SIYG KF DENF  KH  P LLSMANSGP +NG QFFIT      LD KHVVFG V+ +G  +VRKIEN+ T   ++P    TI +CGE+
Sbjct:    6 RRPRVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVI-NGKSIVRKIENMPT-QADKPTTDVTIVDCGEL 179          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 94/166 (56.63%), Postives = 112/166 (67.47%), Query Frame = 1
Query:  118 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 615
            V+FD+T G  P GR+ M L+    P+T ENFR   TGE  KG    GY+G  FHRVIK+FMIQ GDF KGDG+G  SIYG +F DENF  KHT  GLLSMAN+G ++NG QFFIT     WLD KHVVFG VL +G  ++ KIEN  TG  +RP  A  IA+ GE+
Sbjct:   37 VYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGE--KG---FGYEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVL-EGYEIIEKIENSKTGAADRPVEAVKIAKSGEL 196          
BLAST of CX295029 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44
Identity = 91/168 (54.17%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  109 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEY-RKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 609
            N I +FD+TI   PAGR+  ELF D+ PKTA NF+  C G+   + G+ + Y G  FHR IK FM+Q GDF +GDG+G  SIYG KF+DENF  KH  P LLSMAN+GP +NG QFFIT      LD KHVVFGRV+ +  L VR+IEN+ T  ++RP  A TI+  G
Sbjct:    3 NTIAYFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDKTNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSL-VRRIENIPT-TSDRPDQAVTISSAG 168          
The following BLAST results are available for this feature:
BLAST of CX295029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIB_NEUCR2.116e-4458.43Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIA2_RHIOR2.116e-4454.88Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIF_MOUSE2.763e-4455.62Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIC_BOVIN2.763e-4457.83Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB_RAT3.609e-4454.82Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
CP20B_ARATH3.609e-4453.85Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
CYP40_ARATH4.713e-4456.55Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_ASPFU6.156e-4455.68Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIB_GIBZE6.156e-4456.63Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPID_CRYNE8.040e-4454.17Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]

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Properties
Property NameValue
Genbank descriptionC05065G11SK DroRLeaf1 Citrus clementina cDNA clone C05065G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295029 ID=CX295029; Name=CX295029; organism=Citrus clementina; type=EST; length=727bp
AAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGCGAGAGAGATTGATGGC
ATCCGGAGGAGGAGGAGGAGGAAGTGTGGAGTGGCACGTGCGGCCTCCAA
ACCCAAAAAACCCAATCGTATTTTTCGATGTCACAATCGGTACCATCCCC
GCTGGTCGTATCAAGATGGAGCTCTTCGCCGACATCGCCCCTAAAACCGC
CGAAAATTTTAGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATTGC
CTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTATG
ATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCAAT
TTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGGTC
CAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGGGTGCCAG
TTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGCACGTTGT
ATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAGATCGAGA
ATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCACTATCGCA
GAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTGGCATTTC
TAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTGTATATTG
TACGCTTTTAAGATAGATTGATGTGAC
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