CX295033

Overview
NameCX295033
Unique NameCX295033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: CCPR_CANAL (Cytochrome c peroxidase, mitochondrial OS=Candida albicans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  207 LVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKP 659
            L+RL WH +GTYDK+       GG   ++ F  E     NAGL    + +     KY  ++  DL+ L    A++E+GGPKI  + GRVD +   + P  GRLP A      ++++++F RMG N++E VAL GAH +GR     SG+  P
Sbjct:  117 LLRLAWHTSGTYDKSDNSGGSYGG---TMIFAPEEFDPENAGLQVGREFLMEFLVKYPWISRGDLWTLGGVAAVQESGGPKIEWRPGRVDDNTASKVPPNGRLPDAS--KDGKYVKDLFARMGFNERETVALLGAHVLGRCHKHNSGYDGP 262          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  207 LVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIK---DKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKP 659
            ++RL +HDAGT++ +       GG N S+ +E+E     N GL  +LK++   K   D+   V++AD+  +A + A+   GGP IP+  GR+D + P+    EG+LP       A  L+  F R G + +E+VALSGAHT+G       G+G P
Sbjct:  117 VLRLVFHDAGTFELD----DHSGGINGSIAYELE--RPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPD---PEGKLPP--ETLSASGLKECFKRKGFSTQELVALSGAHTIG-----SKGFGDP 254          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_GEOTN (Catalase-peroxidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=katG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 71/204 (34.80%), Postives = 95/204 (46.57%), Query Frame = 3
Query:  159 REDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ---------------CPEEGRL--PAA---------------GPPSP---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            +ED+R+L+  +       + H  P+ +R+ WH AGTY         RGGA+    RF        NA L  A +L+ PIK KY   +++ADLF LA   AIE  GG  I    GRVDV  PE+                 ++G L  P A               G P P   A  +R  F RMG+ND+E VAL +G HT G++
Sbjct:   70 KEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIG----DGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDIYWGAEKEWLASERHSDDGELEHPLAASVMGLIYVNPEGPDGKPDPKAAARDIRETFRRMGMNDEETVALIAGGHTFGKA 269          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_THELT (Catalase-peroxidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=katG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 66/220 (30.00%), Postives = 100/220 (45.45%), Query Frame = 3
Query:  132 SDPDQLKSAR--------EDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGA-NASLRFEVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE-----------------------------------EGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL-SGAHTVGR 626
            SD D LK  +        ED+++L+K++       F H  P+ +RL WH AG+Y  +      RGGA N S+RF   +    N  L  A++L+ PIK KY   +++ADL  LA   A+++ G   +    GR DV   ++ P+                                   EG +    P   A+ +R  F RMG+ND+E VAL +G H+ G+
Sbjct:   38 SDYDYLKEVKTLDVDAVIEDLKKLMKTSQDWWPADFGHYGPLFIRLSWHSAGSYRIH----DGRGGAKNGSIRFPARINWPDNINLDKAIRLLWPIKKKYGKKLSWADLIILAGTVALQDMGVKILGFSLGREDVFEADESPDWGAEQEMLSGKERFKEGELEKPFAATEMGLIYVNPEGPMGNPDPSGSAKEIRLAFTRMGMNDEETVALIAGGHSFGK 253          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_BACHD (Catalase-peroxidase OS=Bacillus halodurans GN=katG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 74/223 (33.18%), Postives = 99/223 (44.39%), Query Frame = 3
Query:  135 DPDQLKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ------------------CPEEGRLPAA---------------GPPSP---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSRPERSGWGKPE 662
            D D LK   +D+R+L++ +       F H  P  +R+ WH AGTY   I +  R GG   + RF        N  L  A +L+ PIK KY   +++ADL  LA   AIE+ GGP I    GR D+  PE+                     E   P A               G P P   A  +R  F RMG+ND+E VAL +G HT G++     G G P+
Sbjct:   63 DYDALK---QDVRDLMRDSQDWWPADFGHYGPFFIRMSWHAAGTY--RIGDG-RGGGGTGNQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLLVLAGNVAIEDMGGPVIGFGAGREDIWHPEEDIYWGSEKEWLTGDKRYSGDRELENPLAAVEMGLIYVNPEGPDGKPDPIKAAHDIRETFGRMGMNDEETVALIAGGHTFGKAH----GAGNPD 275          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_BACST (Catalase-peroxidase OS=Bacillus stearothermophilus GN=katG PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 67/204 (32.84%), Postives = 90/204 (44.12%), Query Frame = 3
Query:  159 REDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-----------------------------------CPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            +ED+R+L+  +       + H  P+ +R+ WH AGTY         RGGA+    RF        NA L  A +L+ PIK KY   +++ADLF LA   AIE  GG  I    GRVDV  PE+                                      EG      P + A  +R  F RMG+ND+E VAL +G HT G++
Sbjct:   70 KEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIG----DGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDVYWGSEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPKAAARDIRETFRRMGMNDEETVALIAGGHTFGKA 269          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_ARCFU (Catalase-peroxidase OS=Archaeoglobus fulgidus GN=katG PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 65/200 (32.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query:  165 DIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGA-NASLRFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP----EEGRLPA---------------------------AGPPSP---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGR 626
            D++EL++S+       F H  P+ +RL WH AG+Y      +  RGGA + S+RF   +    N  L  A++L+ PIK KY   +++ADL  LA   A+E+ G        GR D+  P++ P    EE  L A                            G P P   A+ +R  F RMG+ND+E VAL +G H  G+
Sbjct:   58 DLKELMRSSQDWWPADFGHYGPLFIRLAWHSAGSY----RIFDGRGGARDGSIRFPPRINWPDNINLDKAIRLLWPIKKKYGRKLSWADLIILAGTVAMEDMGVKLFGFALGREDIFEPDESPDWGPEEEMLTAKRGEKEELERPFAATEMGLIYVNPEGPGGNPDPLGSAQEIRVAFRRMGMNDEETVALIAGGHAFGK 253          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 71/204 (34.80%), Postives = 98/204 (48.04%), Query Frame = 3
Query:  159 REDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ---------------CPEEGRL--PAA------------GP---PSP---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            +ED+R+L+  +       F H  P+++R+ WH AGTY   I++   RGGA +   RF        N  L  A +L+ PIK KY   +++ADL  LA   A+E  G   I    GR DV  PE+                 EEG+L  P A            GP   P P   A+ +R  F RMG+ND+E VAL +G HT G++
Sbjct:   58 KEDLRKLMTESQDWWPADFGHYGPLIIRMAWHSAGTY--RIQDG--RGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMNDEETVALIAGGHTFGKT 257          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_GEOKA (Catalase-peroxidase OS=Geobacillus kaustophilus GN=katG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 65/203 (32.02%), Postives = 90/203 (44.33%), Query Frame = 3
Query:  159 REDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-----------------------------------CPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            +ED+R+L+  +       + H  P+ +R+ WH AGTY   I +  R GG+  + RF        NA L  A +L+ PIK KY   +++ADL  LA   AIE  GG  I    GR DV  PE+                                      EG      P + A  +R  F RMG+ND+E VAL +G HT G++
Sbjct:   70 KEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTY--RIGDG-RGGGSTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLMILAGNVAIESMGGKTIGFGGGREDVWHPEEDIYWGAEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPVAAARDIRETFRRMGMNDEETVALIAGGHTFGKA 269          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 66/210 (31.43%), Postives = 87/210 (41.43%), Query Frame = 3
Query:  141 DQLKSAREDIRELLKSTFCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL-RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-------------------CPEEGRLPAAGP-----------------------PSPAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            D LK+   D +    + + H  P  +R+ WH AGTY         RGGAN+   RF        N  L  A +L+ PIK KY   +++ADLF LA   AIE  GGP      GRVDV  PE+                    P +G     GP                          A  ++  F RM +ND+E VAL +G HT G++
Sbjct:   69 DDLKALMTDSQPWWPADYGHYGPFFIRMAWHAAGTY----RTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDDEGMARDMKETFKRMAMNDEETVALTAGGHTFGKA 274          
The following BLAST results are available for this feature:
BLAST of CX295033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
CCPR_CANAL2.965e-2137.75Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
APX6_ARATH1.684e-1636.36Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
KATG_GEOTN4.148e-1534.80Catalase-peroxidase OS=Geobacillus thermodenitrifi... [more]
KATG_THELT5.417e-1530.00Catalase-peroxidase OS=Thermotoga lettingae (strai... [more]
KATG_BACHD7.075e-1533.18Catalase-peroxidase OS=Bacillus halodurans GN=katG... [more]
KATG_BACST1.207e-1432.84Catalase-peroxidase OS=Bacillus stearothermophilus... [more]
KATG_ARCFU1.576e-1432.50Catalase-peroxidase OS=Archaeoglobus fulgidus GN=k... [more]
KATG_SYMTH7.822e-1434.80Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_GEOKA7.822e-1432.02Catalase-peroxidase OS=Geobacillus kaustophilus GN... [more]
KATG_SPHAL2.972e-1331.43Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05065H04SK DroRLeaf1 Citrus clementina cDNA clone C05065H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295033 ID=CX295033; Name=CX295033; organism=Citrus clementina; type=EST; length=687bp
CTTCTTCACTCTCTTTCTCTCTCTCCTCTTCTTCCTCCCTCAAATGCCTC
AGATTCTCTCCTCTCATCAGCCAGAGGAGATCGTCTGTGAACAGAGGATA
TAGCACCGTACCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGTTGA
AGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGCCAT
CCTATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAA
CATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTG
AGGTTGAGCTAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTGAAA
CTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATATGCAGACTT
ATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTAAGA
TCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCT
GAAGAAGGAAGGCTTCCTGCTGCTGGGCCTCCATCACCTGCTGAACATTT
AAGAAATGTCTTTTATAGAATGGGATTAAATGACAAGGAAATAGTTGCCT
TATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAGTGGTTGG
GGCAAGCCAGAAACAAGTACACGAAAGATGGACCAGG
back to top