CX295033

Overview
NameCX295033
Unique NameCX295033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_RHOPS (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB5) GN=katG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 56/179 (31.28%), Postives = 76/179 (42.46%), Query Frame = 3
Query:  204 ILVRLGWHDAGTYDKNIEEWPRRGGANA-SLRFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQC---PE-------------------------------EGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            +++R+ WH AGTY         RGGA A   RF        NA L  A +L+ PIK KY   +++ADL+ L    A+E  G        GR D   PE+    PE                               EG      P + A+ +R  F RM +ND+E VAL +G HT G++
Sbjct:   91 LMIRMAWHSAGTY----RTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERQLHDALGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETFARMAMNDEETVALIAGGHTFGKT 265          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_RHILO (Catalase-peroxidase OS=Rhizobium loti GN=katG PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 64/201 (31.84%), Postives = 85/201 (42.29%), Query Frame = 3
Query:  147 LKSAREDIRELLKSTFCH--PILVRLGWHDAGTYDKNIEEWPRRGGANA-SLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ----CPE-------------------------------EGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 629
            L +   D +E   + F H  P+ +R+ WH AGTY   I +   RGGA A   RF        N  L  A +L+ PIK KY   +++ADL  L    A+E  G        GR DV  PEQ     PE                               EG      P + A  +R+ F RM +ND+E VAL +G HT G++
Sbjct:   69 LHALMTDSQEWWPADFGHYGPLFIRMAWHSAGTY--RIAD--GRGGAGAGQQRFAPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLLILTGNVALESMGFKTFGFAGGRADVWEPEQDVYWGPEGKWLADERYSGDRDLQNPLGAVQMGLIYVNPEGPNGNPDPLAAARDIRDTFARMAMNDEETVALIAGGHTFGKT 265          
BLAST of CX295033 vs. ExPASy Swiss-Prot
Match: KATG_JANSC (Catalase-peroxidase OS=Jannaschia sp. (strain CCS1) GN=katG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 64/197 (32.49%), Postives = 87/197 (44.16%), Query Frame = 3
Query:  201 PILVRLGWHDAGTYDKNIEEWPRRGGA-NASLRFEVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ----CPE---------------EGR---LPAA---------------GPPSP---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSRPERSGWGKPE 662
            P+++RL WH AGTY      +  RGGA   + RF        N  L  A +++ PIK+KY   +++ADL  L    A+E+ G        GR DV  PE+     PE               EGR    P A               G P P   A  +R+ F RM +ND+E VAL +G HT G++     G G P+
Sbjct:   93 PLMIRLAWHSAGTY----RTYDGRGGAGTGTQRFAPLNSWPDNGNLDKARRILWPIKEKYGKSLSWADLLILVGNVALEDMGFETFGFAGGRADVWEPEEDIYWGPETEWLATSDMENTRYGEGRDLHNPLAAVQMGLIYVNPQGPDGNPDPLASAFDIRDTFARMAMNDEETVALVAGGHTFGKAH----GAGDPD 281          
The following BLAST results are available for this feature:
BLAST of CX295033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
KATG_RHOPS8.094e-1131.28Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_RHILO8.094e-1131.84Catalase-peroxidase OS=Rhizobium loti GN=katG PE=3... [more]
KATG_JANSC8.094e-1132.49Catalase-peroxidase OS=Jannaschia sp. (strain CCS1... [more]

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Properties
Property NameValue
Genbank descriptionC05065H04SK DroRLeaf1 Citrus clementina cDNA clone C05065H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295033 ID=CX295033; Name=CX295033; organism=Citrus clementina; type=EST; length=687bp
CTTCTTCACTCTCTTTCTCTCTCTCCTCTTCTTCCTCCCTCAAATGCCTC
AGATTCTCTCCTCTCATCAGCCAGAGGAGATCGTCTGTGAACAGAGGATA
TAGCACCGTACCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGTTGA
AGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGCCAT
CCTATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAA
CATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTG
AGGTTGAGCTAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTGAAA
CTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATATGCAGACTT
ATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTAAGA
TCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCT
GAAGAAGGAAGGCTTCCTGCTGCTGGGCCTCCATCACCTGCTGAACATTT
AAGAAATGTCTTTTATAGAATGGGATTAAATGACAAGGAAATAGTTGCCT
TATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAGTGGTTGG
GGCAAGCCAGAAACAAGTACACGAAAGATGGACCAGG
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